A B C D E F G H I J K L M N O P Q R S T U V W X Z

S

SampleDocumentData - Class in pt.uminho.anote2.carrot.linkage.examples
Some example search results for use off-line.
SampleDocumentData() - Constructor for class pt.uminho.anote2.carrot.linkage.examples.SampleDocumentData
 
Saturation - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
 
SAVE_OPTION_BUTTON_ACTION_COMMAND - Static variable in class pt.uminho.generic.genericpanel.tablesearcher.TableSearchPanel
 
SaveCorpusStatus - Class in pt.uminho.anote2.aibench.corpus.operations
 
SaveCorpusStatus() - Constructor for class pt.uminho.anote2.aibench.corpus.operations.SaveCorpusStatus
 
saveDocDirectoty - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
 
saveFile(File) - Method in class pt.uminho.anote2.aibench.corpus.datatypes.Corpora
 
saveFile(File) - Method in class pt.uminho.anote2.aibench.corpus.operations.SaveCorpusStatus
 
saveFile(File) - Method in class pt.uminho.anote2.aibench.publicationmanager.datatypes.PublicationManager
 
saveFile(File) - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.SavePublicationManagerStatus
 
saveFile(File) - Method in class pt.uminho.anote2.aibench.resources.datatypes.Resources
 
saveFile(File) - Method in class pt.uminho.anote2.aibench.resources.operations.SaveResourceStatus
 
saveFile(File) - Method in interface pt.uminho.anote2.core.configuration.ISaveModule
 
SaveGUI - Class in pt.uminho.anote2.aibench.loadsave.gui
 
SaveGUI() - Constructor for class pt.uminho.anote2.aibench.loadsave.gui.SaveGUI
 
SaveGUI - Class in pt.uminho.anote2.aibench.utils.gui
 
SaveGUI() - Constructor for class pt.uminho.anote2.aibench.utils.gui.SaveGUI
 
SaveLexicalWordsCSV - Class in pt.uminho.anote2.aibench.resources.operations.lexicalwords
 
SaveLexicalWordsCSV() - Constructor for class pt.uminho.anote2.aibench.resources.operations.lexicalwords.SaveLexicalWordsCSV
 
SaveLexicaWordsGUI - Class in pt.uminho.anote2.aibench.resources.gui
 
SaveLexicaWordsGUI() - Constructor for class pt.uminho.anote2.aibench.resources.gui.SaveLexicaWordsGUI
 
SaveLookupTableCSV - Class in pt.uminho.anote2.aibench.resources.operations.lookuptables
 
SaveLookupTableCSV() - Constructor for class pt.uminho.anote2.aibench.resources.operations.lookuptables.SaveLookupTableCSV
 
SaveLookupTableGUI - Class in pt.uminho.anote2.aibench.resources.gui
 
SaveLookupTableGUI() - Constructor for class pt.uminho.anote2.aibench.resources.gui.SaveLookupTableGUI
 
saveNodes() - Method in class pt.uminho.anote2.datastructures.utils.conf.propertiesmanager.PropertiesManager
Static method to save all properties to their correspondent property files.
SaveOperation - Class in pt.uminho.anote2.aibench.loadsave.operations
 
SaveOperation() - Constructor for class pt.uminho.anote2.aibench.loadsave.operations.SaveOperation
 
SaveOperation - Class in pt.uminho.anote2.aibench.utils.operations
 
SaveOperation() - Constructor for class pt.uminho.anote2.aibench.utils.operations.SaveOperation
 
SavePublicationManagerStatus - Class in pt.uminho.anote2.aibench.publicationmanager.operations
 
SavePublicationManagerStatus() - Constructor for class pt.uminho.anote2.aibench.publicationmanager.operations.SavePublicationManagerStatus
 
SaveResourceStatus - Class in pt.uminho.anote2.aibench.resources.operations
 
SaveResourceStatus() - Constructor for class pt.uminho.anote2.aibench.resources.operations.SaveResourceStatus
 
saveSettings(String, String, String, String, String, boolean, String, String) - Static method in class pt.uminho.anote2.datastructures.utils.conf.Configuration
 
saveUserNames() - Method in class org.jdesktop.swingx.auth.DefaultUserNameStore
Saves the user names to Preferences
saveUserNames() - Method in class org.jdesktop.swingx.auth.UserNameStore
lifecycle method for saving name to persistent storage
SavingResultsToXml - Class in pt.uminho.anote2.carrot.linkage.examples
This example shows how to save clustering results to XML.
SavingResultsToXml() - Constructor for class pt.uminho.anote2.carrot.linkage.examples.SavingResultsToXml
 
scoreWeight - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsPropertiesNames
 
Screen - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
 
SCROLL_ON_EXPAND_CHANGED_KEY - Static variable in class org.jdesktop.swingx.JXTaskPane
Used when generating PropertyChangeEvents for the "scrollOnExpand" property
scrollCellToVisible(int, int) - Method in class org.jdesktop.swingx.JXTable
Scrolls to make the cell at row and column visible.
scrollColumnToVisible(int) - Method in class org.jdesktop.swingx.JXTable
Scrolls horizontally to make the given column visible.
scrollPathToVisible(TreePath) - Method in class org.jdesktop.swingx.JXTreeTable
Makes sure all the path components in path are expanded (except for the last path component) and scrolls so that the node identified by the path is displayed.
scrollRowToVisible(int) - Method in class org.jdesktop.swingx.JXTable
Scrolls vertically to make the given row visible.
search(String) - Method in class org.jdesktop.swingx.JXEditorPane.DocumentSearchable
 
search(String, int) - Method in class org.jdesktop.swingx.JXEditorPane.DocumentSearchable
 
search(String, int, boolean) - Method in class org.jdesktop.swingx.JXEditorPane.DocumentSearchable
 
search(Pattern) - Method in class org.jdesktop.swingx.JXEditorPane.DocumentSearchable
 
search(Pattern, int) - Method in class org.jdesktop.swingx.JXEditorPane.DocumentSearchable
 
search(Pattern, int, boolean) - Method in class org.jdesktop.swingx.JXEditorPane.DocumentSearchable
 
search(String) - Method in class org.jdesktop.swingx.search.AbstractSearchable
Performs a forward search starting at the beginning across the Searchable using String that represents a regex pattern; Pattern.
search(String, int) - Method in class org.jdesktop.swingx.search.AbstractSearchable
Performs a forward search starting at the given startIndex using String that represents a regex pattern; Pattern.
search(String, int, boolean) - Method in class org.jdesktop.swingx.search.AbstractSearchable
Performs a search starting at the given startIndex using String that represents a regex pattern; Pattern.
search(Pattern) - Method in class org.jdesktop.swingx.search.AbstractSearchable
Performs a forward search starting at the beginning across the Searchable using the pattern; Pattern.
search(Pattern, int) - Method in class org.jdesktop.swingx.search.AbstractSearchable
Performs a forward search starting at the given startIndex using the Pattern; Pattern.
search(Pattern, int, boolean) - Method in class org.jdesktop.swingx.search.AbstractSearchable
Performs a search starting at the given startIndex using the pattern; Pattern.
search(String) - Method in interface org.jdesktop.swingx.search.Searchable
Search searchString from the beginning of a document.
search(String, int) - Method in interface org.jdesktop.swingx.search.Searchable
Search searchString from the given position in a document.
search(String, int, boolean) - Method in interface org.jdesktop.swingx.search.Searchable
Search searchString in the given direction from the some position in a document.
search(Pattern) - Method in interface org.jdesktop.swingx.search.Searchable
Search for the pattern from the beginning of the document.
search(Pattern, int) - Method in interface org.jdesktop.swingx.search.Searchable
Search for the pattern from the start index.
search(Pattern, int, boolean) - Method in interface org.jdesktop.swingx.search.Searchable
Search for the pattern from the start index.
search(String, String, Properties) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
search(String, String, Properties) - Method in interface pt.uminho.anote2.process.IR.IIRSearch
Search publication online library archives and save details on database
search(String, String, Properties) - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedSearch
 
search(String, boolean, boolean) - Method in class pt.uminho.generic.components.table.tablesearcher.TableModelSearcher
 
search(String) - Method in class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
SEARCH_FIELD_LABEL - Static variable in class org.jdesktop.swingx.AbstractPatternPanel
 
SEARCH_FIELD_MNEMONIC - Static variable in class org.jdesktop.swingx.AbstractPatternPanel
 
SEARCH_OPTION_BUTTON_ACTION_COMMAND - Static variable in class pt.uminho.generic.genericpanel.tablesearcher.TableSearchPanel
 
SEARCH_PREFIX - Static variable in class org.jdesktop.swingx.search.PatternModel
The prefix marker to find component related properties in the resourcebundle.
SEARCH_TITLE - Static variable in class org.jdesktop.swingx.AbstractPatternPanel
 
Searchable - Interface in org.jdesktop.swingx.search
Interface that used to implement search logic in all the search capable components.
SearchableJTable - Class in pt.uminho.generic.genericpanel.tablesearcher
 
SearchableJTable() - Constructor for class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
SearchableJTable(TableModel) - Constructor for class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
SearchableJTable(String) - Constructor for class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
SearchableJTable(TableModel, String, boolean, int...) - Constructor for class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
searchAddProperty(String, String, Properties) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
SearchBasicOptionsPanel - Class in pt.uminho.generic.genericpanel.tablesearcher.searchPanel
 
SearchBasicOptionsPanel() - Constructor for class pt.uminho.generic.genericpanel.tablesearcher.searchPanel.SearchBasicOptionsPanel
 
SearchFactory - Class in org.jdesktop.swingx.search
Factory to create, configure and show application consistent search and find widgets.
SearchFactory() - Constructor for class org.jdesktop.swingx.search.SearchFactory
 
SearchFactory.FindRemover - Class in org.jdesktop.swingx.search
 
SearchFactory.FindRemover() - Constructor for class org.jdesktop.swingx.search.SearchFactory.FindRemover
 
searchingOptionOFF() - Method in class pt.uminho.anote2.aibench.resources.views.DictionaryView
 
searchingOptionON() - Method in class pt.uminho.anote2.aibench.resources.views.DictionaryView
 
searchInTable(KeyEvent) - Method in class pt.uminho.anote2.aibench.corpus.view.CorpusDocumentsView
 
SearchPanel - Class in pt.uminho.generic.genericpanel.tablesearcher.searchPanel
 
SearchPanel() - Constructor for class pt.uminho.generic.genericpanel.tablesearcher.searchPanel.SearchPanel
 
SearchPieces - Class in pt.uminho.anote2.aibench.curator.documentstructuring
 
SearchPieces() - Constructor for class pt.uminho.anote2.aibench.curator.documentstructuring.SearchPieces
 
SearchPredicate - Class in org.jdesktop.swingx.decorator
Pattern based HighlightPredicate for searching.
SearchPredicate(Pattern) - Constructor for class org.jdesktop.swingx.decorator.SearchPredicate
Instantiates a Predicate with the given Pattern.
SearchPredicate(Pattern, int) - Constructor for class org.jdesktop.swingx.decorator.SearchPredicate
Instantiates a Predicate with the given Pattern.
SearchPredicate(Pattern, int, int) - Constructor for class org.jdesktop.swingx.decorator.SearchPredicate
Instantiates a Predicate with the given Pattern.
SearchPredicate(String) - Constructor for class org.jdesktop.swingx.decorator.SearchPredicate
Instantiates a Predicate with a Pattern compiled from the given regular expression.
SearchPredicate(String, int) - Constructor for class org.jdesktop.swingx.decorator.SearchPredicate
Instantiates a Predicate with a Pattern compiled from the given regular expression.
SearchPredicate(String, int, int) - Constructor for class org.jdesktop.swingx.decorator.SearchPredicate
Instantiates a Predicate with a Pattern compiled from the given regular expression.
searchPubmed(String, HashMap<String, Integer>, IIRSearchProcessReport) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
searchPubmed(String, HashMap<String, Integer>, IIRSearchProcessReport) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtensionUpdate
 
searchPubmed(String, HashMap<String, Integer>, IIRSearchProcessReport) - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedSearch
 
searchYearStarting - Static variable in class pt.uminho.anote2.aibench.publicationmanager.datatypes.PublicationManager
 
SelectAIMEDCorpusGUI - Class in pt.uminho.anote2.corpusloaders.gui
 
SelectAIMEDCorpusGUI() - Constructor for class pt.uminho.anote2.corpusloaders.gui.SelectAIMEDCorpusGUI
 
selectAll() - Method in class org.jdesktop.swingx.autocomplete.AutoCompleteComboBoxEditor
 
selectAll() - Method in class pt.uminho.generic.genericpanel.tablesearcher.SelectColumnPanel
 
selectAllClasses - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectAllPublicationQueryInfo - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesPublication
 
selectAllResourceElement - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectAllresources - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectAnnotationFilterByOffset - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.QueriesIEProcess
 
SelectAnoteV1CorpusGUI - Class in pt.uminho.anote2.corpusloaders.gui
 
SelectAnoteV1CorpusGUI() - Constructor for class pt.uminho.anote2.corpusloaders.gui.SelectAnoteV1CorpusGUI
 
selectClassColor - Static variable in class pt.uminho.anote2.datastructures.database.queries.QueriesGeneral
 
selectClusterLabels - Static variable in class pt.uminho.anote2.datastructures.database.queries.clusters.QueriesClusters
 
selectClusterLabelsDocuments - Static variable in class pt.uminho.anote2.datastructures.database.queries.clusters.QueriesClusters
 
selectClusterProperties - Static variable in class pt.uminho.anote2.datastructures.database.queries.clusters.QueriesClusters
 
SelectColumnPanel - Class in pt.uminho.generic.genericpanel.tablesearcher
 
SelectColumnPanel(String[]) - Constructor for class pt.uminho.generic.genericpanel.tablesearcher.SelectColumnPanel
 
selectCorpora - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectCorporaInformationByID - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectCorpusProcesses - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectCorpusProperties - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectCorpusPublications - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectCountCorpusProcesses - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectedJCheckBoxAll() - Method in class pt.uminho.anote2.aibench.publicationmanager.gui.panes.PubmedSearchAdvancePanel
 
selectElementByIDWihoutActiveFilter - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectElementClass - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectElementExternalID - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectElementSynByID - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectEntityAnnotations - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesAnnotatedDocument
Entities Annotations
selectEventAnnotations - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesAnnotatedDocument
 
selectEventEntitiesAnnotations - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesAnnotatedDocument
 
selectEventProperties - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesAnnotatedDocument
 
selectExternalIDandSource - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.dics.QueriesDics
 
selectFile(ActionEvent) - Method in class pt.uminho.anote2.aibench.loadsave.gui.SaveGUI
 
selectFile(ActionEvent) - Method in class pt.uminho.anote2.aibench.utils.gui.SaveGUI
 
SelectGeniaEventCorpusGUI - Class in pt.uminho.anote2.corpusloaders.gui
 
SelectGeniaEventCorpusGUI() - Constructor for class pt.uminho.anote2.corpusloaders.gui.SelectGeniaEventCorpusGUI
 
selectIDAndPmidsForQuery - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesPublication
 
SELECTION_MODEL - Static variable in class org.jdesktop.swingx.JXMonthView
 
SelectionGeneralPane - Class in pt.uminho.anote2.workflow.gui.wizard.panes
This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
SelectionGeneralPane() - Constructor for class pt.uminho.anote2.workflow.gui.wizard.panes.SelectionGeneralPane
 
SelectionMapper - Interface in org.jdesktop.swingx.decorator
Responsible for keeping track of selection in model coordinates.
SelectionQueryPane - Class in pt.uminho.anote2.workflow.gui.wizard.panes
This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
SelectionQueryPane() - Constructor for class pt.uminho.anote2.workflow.gui.wizard.panes.SelectionQueryPane
 
selectJCheckBoxAllDocuments() - Method in class pt.uminho.anote2.aibench.publicationmanager.gui.panes.PubmedSearchAdvancePanel
 
selectjCheckBoxAvailableAbstract() - Method in class pt.uminho.anote2.aibench.publicationmanager.gui.panes.PubmedSearchAdvancePanel
 
selectJCheckBoxFreeFullText() - Method in class pt.uminho.anote2.aibench.publicationmanager.gui.panes.PubmedSearchAdvancePanel
 
selectJCheckBoxMedline() - Method in class pt.uminho.anote2.aibench.publicationmanager.gui.panes.PubmedSearchAdvancePanel
 
selectJCheckPubmed() - Method in class pt.uminho.anote2.aibench.publicationmanager.gui.panes.PubmedSearchAdvancePanel
 
selectLastQueriesPubmed - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.QueriesProcess
 
selectProcesses - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectProcessInfoByID - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectProcessProperties - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectPublication - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesPublication
 
selectPublicationIDForPublicationOtherID - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesPublication
 
selectPublicationIndetifierTypeID - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesPublication
Publication IndentifierTypeID
selectPublicationRelevanceForQuery - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesDocument
 
selectPublicationsbyID - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
 
selectPublicationsQueryExtra - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesPublication
 
selectPublicationsResume - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesPublication
 
selectPublicationsTypeForPublication - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesPublication
 
selectPublicationType - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesPublication
 
selectQueriesInformationByID - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.QueriesIRProcess
 
selectQueriesPubmed - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.QueriesProcess
 
selectQueryByID - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.QueriesIRProcess
 
selectQueryClusters - Static variable in class pt.uminho.anote2.datastructures.database.queries.clusters.QueriesClusters
 
selectQueryClustersID - Static variable in class pt.uminho.anote2.datastructures.database.queries.clusters.QueriesClusters
 
SelectQueryDocumentPanel - Class in pt.uminho.anote2.aibench.publicationmanager.gui.help
This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
SelectQueryDocumentPanel(QueryInformationRetrievalExtension) - Constructor for class pt.uminho.anote2.aibench.publicationmanager.gui.help.SelectQueryDocumentPanel
 
selectQueryProperties - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.QueriesIRProcess
 
selectRelationsOntology - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectRelationTypeID - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectRelevancePublication - Static variable in class pt.uminho.anote2.datastructures.database.queries.documents.QueriesDocument
 
selectResourceclassContent - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectResourceClassesContent - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectResourceElement - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectResourceElementAndClass - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectResourceElementCount - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectResourceFilterByType - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectResourceInformtaionByID - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectResourceTypes - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
SelectSourceGUI - Class in pt.uminho.anote2.aibench.curator.gui
This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
SelectSourceGUI(Map<Integer, Source>, MenuItem, JList) - Constructor for class pt.uminho.anote2.aibench.curator.gui.SelectSourceGUI
 
selectSourcesIDByName - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
selectSynTermsClass - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.dics.QueriesDics
 
selectTermsClass - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.dics.QueriesDics
 
Sentence - Class in pt.uminho.anote2.datastructures.documents
 
Sentence(long, long, String) - Constructor for class pt.uminho.anote2.datastructures.documents.Sentence
 
Sentence(long, long, String, List<IPOSToken>) - Constructor for class pt.uminho.anote2.datastructures.documents.Sentence
 
sentenceModelFile - Static variable in class pt.uminho.anote2.datastructures.nlptools.OpenNLP
 
SentenceSintaxRepresentation - Class in pt.uminho.anote2.process.IE.re
 
SentenceSintaxRepresentation() - Constructor for class pt.uminho.anote2.process.IE.re.SentenceSintaxRepresentation
 
sentenceSpliter(File) - Method in class pt.uminho.anote2.relation.gate.Gate7PosTagger
 
sentenceSpliter(File) - Method in interface pt.uminho.gate.process.IGatePosTagger
 
SEPARATOR - Static variable in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocument
 
SEPARATOR - Static variable in class pt.uminho.anote2.datastructures.textprocessing.TermSeparator
 
ServerAction - Class in org.jdesktop.swingx.action
An action which will invoke an http POST operation.
ServerAction() - Constructor for class org.jdesktop.swingx.action.ServerAction
 
ServerAction(String) - Constructor for class org.jdesktop.swingx.action.ServerAction
 
ServerAction(String, String) - Constructor for class org.jdesktop.swingx.action.ServerAction
 
ServerAction(String, Icon) - Constructor for class org.jdesktop.swingx.action.ServerAction
 
ServerAction(String, String, Icon) - Constructor for class org.jdesktop.swingx.action.ServerAction
 
set(String, String, char[]) - Method in class org.jdesktop.swingx.auth.PasswordStore
Saves a password for future use.
setAbstractSection(String) - Method in class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
setAccelerator(KeyStroke) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Sets the key stroke which represents an accelerator for the action.
setActionCommand(Object) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Sets the action command key.
setActionManager(ActionManager) - Method in class org.jdesktop.swingx.action.ActionContainerFactory
Sets the ActionManager instance that will be used by this ActionContainerFactory
setActive(boolean) - Method in class pt.uminho.anote2.datastructures.resources.ResourcesHelp
 
setActuaPubs(int) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
setActuaPubs(int) - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedSearch
 
setAcyclic(boolean) - Method in class pt.uminho.generic.components.gradientpanel.GradientGUI
 
setAddon(String) - Static method in class org.jdesktop.swingx.plaf.LookAndFeelAddons
 
setAddon(Class<?>) - Static method in class org.jdesktop.swingx.plaf.LookAndFeelAddons
 
setAddon(LookAndFeelAddons) - Static method in class org.jdesktop.swingx.plaf.LookAndFeelAddons
 
setAdjusting(boolean) - Method in class org.jdesktop.swingx.calendar.AbstractDateSelectionModel
Set the property to mark upcoming selections as intermediate/ final.
setAdjusting(boolean) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Set the property to mark upcoming selections as intermediate/ final.
setAlgoritm(CarrotClusterAlgorithmsEnum) - Method in class pt.uminho.anote2.carrot.linkage.operations.QueryGerateCarrotClusterOperation
 
setAllowMultipleSelection(boolean) - Method in class pt.uminho.generic.genericpanel.filechooser.FileChooserAibench
 
setAllowsChildren(boolean) - Method in class org.jdesktop.swingx.treetable.AbstractMutableTreeTableNode
Determines whether or not this node is allowed to have children.
setAlpha(Color, int) - Static method in class org.jdesktop.swingx.color.ColorUtil
Returns a new color equal to the old one, except alpha (transparency) channel is set to the new value.
setAlpha(float) - Method in class org.jdesktop.swingx.JXGlassBox
 
setAlpha(float) - Method in class org.jdesktop.swingx.JXPanel
Set the alpha transparency level for this component.
setAlpha(float) - Method in class org.jdesktop.swingx.painter.AlphaPainter
Sets the current alpha value for this painter.
setAngle(double) - Method in class org.jdesktop.swingx.painter.PinstripePainter
Sets the angle, in degrees, at which to paint the pinstripes.
setAnimated(boolean) - Method in class org.jdesktop.swingx.JXCollapsiblePane
If true, enables the animation when pane is collapsed/expanded.
setAnimated(boolean) - Method in class org.jdesktop.swingx.JXTaskPane
Enables or disables animation during expand/collapse transition.
setAnnotations(ANoteDocumentAnnotations) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocument
 
setAnnotations(ANoteDocumentAnnotations) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentData
 
setAnnotations(ANoteDocumentAnnotations) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentPreviousData
 
setAnnotationValueNormalization(String) - Method in class pt.uminho.anote2.datastructures.annotation.ner.EntityAnnotation
 
setAnnotEventPositions(AnnotationPositions) - Method in class pt.uminho.anote2.aibench.corpus.datatypes.REDocumentAnnotation
 
setAnnotNERAnnotations(AnnotationPositions) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentPreviousData
 
setAnnotPositions(AnnotationPositions) - Method in class pt.uminho.anote2.aibench.corpus.datatypes.NERDocumentAnnotation
 
setAntiAliasedText(boolean) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setAntialiasing(boolean) - Method in class org.jdesktop.swingx.painter.AbstractPainter
Sets the antialiasing setting.
setAreaEffects(AreaEffect...) - Method in class org.jdesktop.swingx.painter.AbstractAreaPainter
Sets the path effects to be drawn on this painter.
setAscending(boolean) - Method in class org.jdesktop.swingx.decorator.Sorter
 
setAssociativeCorpus(ICorpus) - Method in class pt.uminho.anote2.relation.core.gate.RelationsExtraction
 
setAuthors(String) - Method in class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
setAutoResizeMode(int) - Method in class org.jdesktop.swingx.JXTable
Overridden for internal bookkeeping related to the enhanced auto-resize behaviour.
setAutoStartEditOnKeyStroke(boolean) - Method in class org.jdesktop.swingx.JXTable
Sets the autoStartsEdit property.
setAvailable_abstracts(int) - Method in class pt.uminho.anote2.datastructures.documents.query.QueryInformationRetrieval
 
setAxisColor(Color) - Method in class org.jdesktop.swingx.JXGraph
Sets the color of main axis on this component.
setAxisPainted(boolean) - Method in class org.jdesktop.swingx.JXGraph
Enables or disables the painting of main axis depending on the value of the parameter.
setBackButtonIcon(ImageIcon) - Method in class pt.uminho.generic.wizard2.Wizard
 
setBackground(Color) - Method in class org.jdesktop.swingx.decorator.ColorHighlighter
Sets the background color of this ColorHighlighter and notifies registered ChangeListeners.
setBackground(Color) - Method in class org.jdesktop.swingx.JXPanel
Sets the background color for this component by
setBackground(Color) - Method in class org.jdesktop.swingx.renderer.AbstractRenderer
 
setBackground(Color) - Method in class org.jdesktop.swingx.renderer.DefaultVisuals
Sets the renderer's unselected-background color to the specified color.
setBackground(Color) - Method in class org.jdesktop.swingx.renderer.WrappingIconPanel
Sets the background color for this component by
setBackground(Color) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setBackgroundColor(Container, Color) - Static method in class org.jdesktop.swingx.util.PaintUtils
Deprecated. (pre 0.9.6) use SwingXUtilities.setComponentTreeBackground(Component, Color)
setBackgroundPainted(boolean) - Method in class org.jdesktop.swingx.JXGraph
Enables or disables the painting of background depending on the value of the parameter.
setBackgroundPainter(Painter<JXButton>) - Method in class org.jdesktop.swingx.JXButton
 
setBackgroundPainter(Painter) - Method in class org.jdesktop.swingx.JXLabel
Sets a Painter to use to paint the background of this component By default there is already a single painter installed which draws the normal background for this component according to the current Look and Feel.
setBackgroundPainter(Painter) - Method in class org.jdesktop.swingx.JXMultiSplitPane
Specifies a Painter to use to paint the background of this JXPanel.
setBackgroundPainter(Painter) - Method in class org.jdesktop.swingx.JXPanel
Sets a Painter to use to paint the background of this JXPanel.
setBackwards(boolean) - Method in class org.jdesktop.swingx.search.PatternModel
 
setBanner(Image) - Method in class org.jdesktop.swingx.JXLoginPane
Set the image to use for the banner.
setBannerText(String) - Method in class org.jdesktop.swingx.JXLoginPane
Set the text to use when creating the banner.
setBaseColor(Color) - Method in class org.jdesktop.swingx.painter.BusyPainter
Sets new base color.
setBaseObject(Object) - Method in class pt.uminho.generic.wizard2.DynamicPanel
 
setBdName(String) - Method in class es.uvigo.ei.sing.BioSearch.datatypes.CollectionResult
 
setBiowarehouse(IDatabase) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UpdateDictionaryBiowareHouse
 
setBlurEnabled(boolean) - Method in class org.jdesktop.swingx.graphics.ReflectionRenderer
Setting the blur to true will enable the blurring of the reflection when ReflectionRenderer.createReflection(java.awt.image.BufferedImage) is invoked.
setBlurRadius(int) - Method in class org.jdesktop.swingx.graphics.ReflectionRenderer
Sets the radius, in pixels, of the blur used by this renderer when ReflectionRenderer.isBlurEnabled() is true.
setBorder(Border) - Method in class org.jdesktop.swingx.decorator.BorderHighlighter
Sets the Border used for highlighting.
setBorder(Border) - Method in class org.jdesktop.swingx.JXCollapsiblePane
setBorderPaint(Paint) - Method in class org.jdesktop.swingx.painter.AbstractAreaPainter
The Paint to use for stroking the shape (painting the outline).
setBorderPainted(boolean) - Method in class org.jdesktop.swingx.JXButton
 
setBorderPainted(boolean) - Method in class org.jdesktop.swingx.renderer.CheckBoxProvider
Sets the border painted flag.
setBorderPosition(NeonBorderEffect.BorderPosition) - Method in class org.jdesktop.swingx.painter.effects.NeonBorderEffect
 
setBorderWidth(float) - Method in class org.jdesktop.swingx.painter.AbstractAreaPainter
Sets the border width to use for painting.
setBounds(int, int, int, int) - Method in class org.jdesktop.swingx.JXMultiThumbSlider
 
setBounds(Rectangle) - Method in class org.jdesktop.swingx.MultiSplitLayout.Node
Set the bounding Rectangle for this node.
setBoxPaddingX(int) - Method in class org.jdesktop.swingx.JXMonthView
Sets the number of pixels used to pad the left and right side of a day.
setBoxPaddingY(int) - Method in class org.jdesktop.swingx.JXMonthView
Sets the number of pixels used to pad the top and bottom of a day.
setBranchesCount(int) - Method in class org.jdesktop.swingx.geom.Star2D
Sets the number branches of the star.
setBrightness(Color, float) - Static method in class org.jdesktop.swingx.color.ColorUtil
Returns a new color equal to the old one, except the brightness is set to the new value.
setBrushColor(Color) - Method in class org.jdesktop.swingx.painter.effects.AbstractAreaEffect
Setter for property brushColor.
setBrushSteps(int) - Method in class org.jdesktop.swingx.painter.effects.AbstractAreaEffect
Setter for property brushSteps.
setBusy(boolean) - Method in class org.jdesktop.swingx.JXBusyLabel
Sets whether this JXBusyLabel instance should consider itself busy.
setBusyPainter(BusyPainter) - Method in class org.jdesktop.swingx.JXBusyLabel
 
setCacheable(boolean) - Method in class org.jdesktop.swingx.painter.AbstractPainter
Sets whether this AbstractPainter can be cached as an image.
setCallback(String) - Method in class org.jdesktop.swingx.action.BoundAction
The callback string will be called to register the action callback.
setCancel(boolean) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.biocyc.BioCycCoumpoundExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.biocyc.BioCycGeneExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.biocyc.BioCycPathwaysExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.biocyc.BioCycProteinExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.biocyc.BioCycReactionExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.brenda.BrendaExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.ChebiExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.entrezgene.EntrezGeneExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.kegg.KeggCompoundExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.kegg.KeggEnzymesExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.kegg.KeggGenesExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.kegg.KeggReactionsExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.NcbiTaxonomyExtension
 
setcancel(boolean) - Method in class pt.uminho.anote2.aibench.resources.datastructures.UniprotExtension
 
setCancel() - Method in class pt.uminho.anote2.aibench.resources.datatypes.DictionaryAibench
 
setCancel() - Method in class pt.uminho.anote2.aibench.resources.operations.dics.LoadDictionaryCSV
 
setcancel() - Method in interface pt.uminho.anote2.core.report.IReport
 
setcancel() - Method in class pt.uminho.anote2.datastructures.process.re.export.network.export.REProcessToNetwork
 
setcancel() - Method in class pt.uminho.anote2.datastructures.report.Report
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.Biowarehouse.BiowarehouseLoader
 
setCancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.Biowarehouse.BiowarehouseLoader
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.brenda.Brenda
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCyc
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCycCompound
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.Chebi
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.entrezgene.EntrezGene
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.KeggCompound
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.KeggEnzymes
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.KeggGenes
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.KeggReactions
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.NcbiTaxonomy
 
setcancel(boolean) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.UniProt
 
setcancel() - Method in interface pt.uminho.anote2.process.IE.re.IRESchemaToNetwork
 
setcancel(boolean) - Method in interface pt.uminho.anote2.resource.dictionary.IDictionaryLoader
 
setCancelButton(JButton) - Method in class org.jdesktop.swingx.JXFrame
 
setCancelButton(JButton) - Method in class org.jdesktop.swingx.JXRootPane
Sets the cancelButton property, which determines the current default cancel button for this JRootPane.
setCancelButton(JButton) - Method in class pt.uminho.anote2.aibench.utils.conf.propertiesmanager.OkCancelMiniPanel
 
setCancelButtonIcon(ImageIcon) - Method in class pt.uminho.generic.wizard2.Wizard
 
setCaretPosition(int) - Method in class pt.uminho.anote2.aibench.curator.view.ANoteDocumentView
 
setCaretPosition(int) - Method in class pt.uminho.anote2.aibench.curator.view.REANoteDocumentView
 
setCaseSensitive(boolean) - Method in class org.jdesktop.swingx.search.PatternModel
 
setCaseSensitive(boolean) - Method in class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
setCatalogue(PublicationManager) - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.PubmedSearchOperation
 
setCellRenderer(ListCellRenderer) - Method in class org.jdesktop.swingx.JXList
Overridden to wrap the given renderer in a DelegatingRenderer to support highlighting.
setCellRenderer(TreeCellRenderer) - Method in class org.jdesktop.swingx.JXTree
Overridden to wrap the given renderer in a DelegatingRenderer to support highlighting.
setCenterColor(Color) - Method in class org.jdesktop.swingx.painter.effects.NeonBorderEffect
 
setCharacterAttributes(int, int, AttributeSet, boolean) - Method in class org.jdesktop.swingx.autocomplete.AutoCompleteStyledDocument
setCheckingDirtyChildPainters(boolean) - Method in class org.jdesktop.swingx.painter.CompoundPainter
Set the flag used by CompoundPainter.isDirty() to check if the child Painters should be checked for their dirty flag as part of processing.
setChemistryCompounds(boolean) - Method in class pt.uminho.anote2.nergate.operations.OperationNERChemistryTagging
 
setChemistryElements(boolean) - Method in class pt.uminho.anote2.nergate.operations.OperationNERChemistryTagging
 
setChemistrylon(boolean) - Method in class pt.uminho.anote2.nergate.operations.OperationNERChemistryTagging
 
setChild(int, InterfaceTreeNode<T>) - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeNodeOntology
 
setChild(int, InterfaceTreeNode<T>) - Method in interface pt.uminho.anote2.datastructures.utils.tree.InterfaceTreeNode
 
setChildren(List<MultiSplitLayout.Node>) - Method in class org.jdesktop.swingx.MultiSplitLayout.Split
Set's the children property of this Split node.
setChildren(MultiSplitLayout.Node...) - Method in class org.jdesktop.swingx.MultiSplitLayout.Split
Convenience method for setting the children of this Split node.
setChildValue(T, InterfaceTreeNode<T>, int) - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeOntology
 
setChildValue(InterfaceTreeNode<T>, InterfaceTreeNode<T>, int) - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeOntology
 
setChildValue(TreeOntology<T>, InterfaceTreeNode<T>, int) - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeOntology
 
setChooser(JColorChooser) - Method in class org.jdesktop.swingx.JXColorSelectionButton
Set the JColorChooser that is used by this JXColorSelectionButton.
setClasse(String) - Method in class pt.uminho.anote2.aibench.curator.gui.NewClassGUI
 
setClassID(int) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.RemoveClassElementsOperation
 
setClassIDEntities(SortedMap<SimpleEntity, EntityAndSynonymsStats>) - Method in class pt.uminho.anote2.aibench.corpus.stats.ClassEntities
 
setClassTermAnnotations(Map<String, HashMap<String, ANoteAnnotation>>) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentAnnotations
 
setClearText(String) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentText
 
setClickCountToStart(int) - Method in class org.jdesktop.swingx.table.DatePickerCellEditor
Specifies the number of clicks needed to start editing.
setClicked(boolean) - Method in class org.jdesktop.swingx.JXHyperlink
Sets the clicked property and updates visual state depending on clicked.
setClickedColor(Color) - Method in class org.jdesktop.swingx.JXHyperlink
Sets the color for the previously not visited link.
setClipPreserved(boolean) - Method in class org.jdesktop.swingx.painter.CompoundPainter
Sets if the clip should be preserved.
setClosedIcon(Icon) - Method in class org.jdesktop.swingx.JXTree.DelegatingRenderer
 
setClosedIcon(Icon) - Method in class org.jdesktop.swingx.JXTree
Sets the Icon to use for a closed folder node.
setClosedIcon(Icon) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the specified icon as the icon to use for rendering closed container nodes.
setClusters(List<ILabelCluster>) - Method in class pt.uminho.anote2.carrot.linkage.operations.CreareQueryFromClusterOperation
 
setCollapsed(boolean) - Method in class org.jdesktop.swingx.JXCollapsiblePane
Expands or collapses this JXCollapsiblePane.
setCollapsed(boolean) - Method in class org.jdesktop.swingx.JXTaskPane
Expands or collapses this group.
setCollapsedIcon(Icon) - Method in class org.jdesktop.swingx.JXTree
Sets the Icon to use for the handle of a collapsed node.
setCollapsedIcon(Icon) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the specified icon as the icon to use for rendering collapsed nodes.
setColor(Color) - Method in class org.jdesktop.swingx.graphics.ShadowRenderer
Sets the color used by the renderer to generate shadows.
setColor(String) - Method in class pt.uminho.anote2.datastructures.annotation.properties.AnnotationColorStyleProperty
 
setColor1(Color) - Method in class pt.uminho.generic.components.gradientpanel.GradientGUI
 
setColor2(Color) - Method in class pt.uminho.generic.components.gradientpanel.GradientGUI
 
setColumnControl(JComponent) - Method in class org.jdesktop.swingx.JXTable
Sets the component used as column control.
setColumnControlVisible(boolean) - Method in class org.jdesktop.swingx.JXTable
Sets the column control visible property.
setColumnFactory(ColumnFactory) - Method in class org.jdesktop.swingx.JXTable
Sets the ColumnFactory to use for column creation and configuration.
setColumnIdentifiers(List<?>) - Method in class org.jdesktop.swingx.treetable.DefaultTreeTableModel
Replaces the column identifiers in the model.
setColumnIndex(int) - Method in class org.jdesktop.swingx.decorator.Filter
TODO: PENDING: not tested!
setColumnMargin(int) - Method in class org.jdesktop.swingx.JXTable
Sets the margin between columns.
setColumnNameColumnParameters(Map<String, ColumnParameters>) - Method in class pt.uminho.anote2.datastructures.utils.generic.ColumnDelemiterDefaultValue
 
setColumnNumber(int) - Method in class pt.uminho.anote2.datastructures.utils.generic.ColumnParameters
 
setColumnSequence(Object[]) - Method in class org.jdesktop.swingx.JXTable
Reorders the columns in the sequence given array.
setColumsDelemiterDefaultValue(ColumnDelemiterDefaultValue) - Method in class pt.uminho.anote2.datastructures.utils.generic.CSVFileConfigurations
 
setCommonName(String) - Method in class pt.uminho.anote2.aibench.corpus.utils.ANoteAnnotation
 
setCommonName(String) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteAnnotation
 
setComparator(Comparator) - Method in class org.jdesktop.swingx.decorator.Sorter
set the Comparator to use when comparing values.
setComparator(Comparator<?>) - Method in class org.jdesktop.swingx.JXList
Sets the comparator used.
setComparator(Comparator) - Method in class org.jdesktop.swingx.table.TableColumnExt
Sets the comparator to use for this column.
setComponent(JComponent) - Method in class org.jdesktop.swingx.renderer.WrappingIconPanel
Sets the delegate component.
setComponentInputMapEnabled(boolean) - Method in class org.jdesktop.swingx.JXMonthView
Sets the component input map enablement property.
setComponentOrientation(ComponentOrientation) - Method in class org.jdesktop.swingx.JXDatePicker
 
setComponentOrientation(ComponentOrientation) - Method in class org.jdesktop.swingx.JXLoginPane
This method adds functionality to support bidi languages within this component
setComponentOrientation(ComponentOrientation) - Method in class org.jdesktop.swingx.JXTable
Sets the language-sensitive orientation that is to be used to order the elements or text within this component.
setComponentOrientation(ComponentOrientation) - Method in class org.jdesktop.swingx.JXTitledSeparator
setComponentOrientation(ComponentOrientation) - Method in class org.jdesktop.swingx.renderer.WrappingIconPanel
Overridden to update the icon position.
setComponentTreeBackground(Component, Color) - Static method in class org.jdesktop.swingx.SwingXUtilities
Sets the background for an entire component hierarchy to the specified color.
setComponentTreeEnabled(Component, boolean) - Static method in class org.jdesktop.swingx.SwingXUtilities
Enables or disables of the components in the tree starting with c.
setComponentTreeFont(Component, Font) - Static method in class org.jdesktop.swingx.SwingXUtilities
Sets the font for an entire component hierarchy to the specified font.
setComponentTreeForeground(Component, Color) - Static method in class org.jdesktop.swingx.SwingXUtilities
Sets the foreground for an entire component hierarchy to the specified color.
setComponentTreeLocale(Component, Locale) - Static method in class org.jdesktop.swingx.SwingXUtilities
Sets the locale for an entire component hierarchy to the specified locale.
setCompound(boolean) - Method in class org.jdesktop.swingx.decorator.BorderHighlighter
Sets the compound property.
setConditionalVerbsSet(Set<String>) - Method in interface pt.uminho.anote2.process.IE.re.IPolarity
 
setConditionalVerbsSet(Set<String>) - Method in class pt.uminho.anote2.relation.datastructures.Polarity
 
setConfiguration(IREToNetworkConfiguration) - Method in class pt.uminho.anote2.aibench.corpus.operations.ExportRESchemaToXGMMLOperation
 
setConfiguration(INERLexicalResourcesConfiguration) - Method in class pt.uminho.anote2.aibench.ner.operations.OperationNerAnote
 
setConfltitsPanel() - Method in class pt.uminho.anote2.aibench.resources.gui.MergeDictionariesReportGUI
 
setConfltitsPanel() - Method in class pt.uminho.anote2.aibench.resources.gui.MergeLexicalWordsReportGUI
 
setConfltitsPanel() - Method in class pt.uminho.anote2.aibench.resources.gui.MergeReportGUI
 
setConfltitsPanel() - Method in class pt.uminho.anote2.aibench.resources.gui.MergeRulesSerReportGUI
 
setConfltitsPanel() - Method in class pt.uminho.anote2.aibench.resources.gui.UpdateReportGUI
 
setConnection(Connection) - Method in class org.jdesktop.swingx.auth.JDBCLoginService
 
setConnection(Connection) - Method in class pt.uminho.anote2.aibench.resources.views.DictionariesView
 
setConnection(Connection) - Method in class pt.uminho.anote2.aibench.resources.views.LexicalWordsSetView
 
setConnection(Connection) - Method in class pt.uminho.anote2.aibench.resources.views.LookupTablesView
 
setConnection(Connection) - Method in class pt.uminho.anote2.datastructures.database.ADatabase
 
setConstraints(GridBagConstraints, int, int, int, int, double, double, int, int, int, int, int, int) - Static method in class org.jdesktop.swingx.util.WindowUtils
Deprecated. (pre 0.9.6) no replacement
setContent(String) - Method in class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
setContentAreaFilled(boolean) - Method in class org.jdesktop.swingx.JXButton
 
setContentContainer(Container) - Method in class org.jdesktop.swingx.JXTitledPanel
 
setContentPane(Container) - Method in class org.jdesktop.swingx.JXCollapsiblePane
Sets the content pane of this JXCollapsiblePane.
setContinuousLayout(boolean) - Method in class org.jdesktop.swingx.JXMultiSplitPane
Sets the value of the continuousLayout property.
setCornerSize(int) - Method in class org.jdesktop.swingx.border.DropShadowBorder
 
setCorporar(Corpora) - Method in class pt.uminho.anote2.aibench.corpus.operations.SaveCorpusStatus
 
setCorpus(Corpus) - Method in class pt.uminho.anote2.aibench.curator.operation.OperationManualCuration
 
setCorpus(Corpus) - Method in class pt.uminho.anote2.aibench.ner.operations.OperationApplySameNERAnote
 
setCorpus(Corpus) - Method in class pt.uminho.anote2.aibench.ner.operations.OperationNerAnote
 
setCorpus(ICorpus) - Method in interface pt.uminho.anote2.core.report.corpora.ICorpusCreateReport
 
setCorpus(ICorpus) - Method in class pt.uminho.anote2.datastructures.documents.AnnotatedDocument
 
setCorpus(ICorpus) - Method in class pt.uminho.anote2.datastructures.report.corpora.CorpusCreateReport
 
setCorpus(Corpus) - Method in class pt.uminho.anote2.nergate.operations.OperationNERAbner
 
setCorpus(Corpus) - Method in class pt.uminho.anote2.nergate.operations.OperationNERChemistryTagging
 
setCorpus(boolean) - Method in class pt.uminho.anote2.nergate.operations.OperationNERChemistryTagging
 
setCorpus(ICorpus) - Method in class pt.uminho.anote2.relation.core.relationModels.RelationModelDefault
 
setCorpusSize(int) - Method in class pt.uminho.anote2.corpusloaders.loaders.AIMEDProteinCorpusLoader
 
setCount(int) - Method in class pt.uminho.anote2.aibench.corpus.utils.ANoteAnnotation
 
setCount(int) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteAnnotation
 
setCSVFile(CSVFileConfigurations) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.LoadLexicalWordsCSV
 
setCurrentPanel(String) - Method in class pt.uminho.generic.wizard2.Wizard
 
setCurrentTip(int) - Method in class org.jdesktop.swingx.JXTipOfTheDay
Sets the index of the tip to show
setCursor(Cursor) - Method in class org.jdesktop.swingx.JXFrame
 
setDarkPaint(Paint) - Method in class org.jdesktop.swingx.painter.CheckerboardPainter
Specifies the paint to use for dark tiles.
setDatabase(IDatabase) - Method in class pt.uminho.anote2.aibench.utils.operations.ChangeDBSettingsOperation
 
setDatabase(IDatabase) - Method in class pt.uminho.anote2.aibench.utils.operations.CreateConfigurationsFile
 
setDataContainerObject(T) - Method in class pt.uminho.generic.wizard2.Wizard
 
setDate(Date) - Method in class org.jdesktop.swingx.JXDatePicker
Sets the date property.
setDate(String) - Method in class pt.uminho.anote2.datastructures.documents.Publication
 
setDate(Date) - Method in class pt.uminho.anote2.datastructures.documents.query.QueryInformationRetrieval
 
setDayForeground(int, Color) - Method in class org.jdesktop.swingx.JXMonthView
Set the color to be used for painting the specified day of the week.
setDaysOfTheWeek(String[]) - Method in class org.jdesktop.swingx.JXMonthView
Sets the String representation for each day of the week as used in the header of the day's grid.
setDaysOfTheWeekForeground(Color) - Method in class org.jdesktop.swingx.JXMonthView
Sets the color used to draw the foreground of each day of the week.
setDbPublicationFields(List<String>) - Method in class pt.uminho.anote2.aibench.curator.documentstructuring.DocumentStructuring
 
setDefaultButton(JButton) - Method in class org.jdesktop.swingx.JXFrame
 
setDefaultImage(Image) - Method in class org.jdesktop.swingx.JXImagePanel
 
setDefaultPackMargin(int) - Method in class org.jdesktop.swingx.table.ColumnFactory
Sets the default pack margin.
setDefaultValue(DefaultDelimiterValue) - Method in class pt.uminho.anote2.datastructures.utils.generic.ColumnParameters
 
setDefaulValue(int) - Method in class pt.uminho.generic.genericpanel.delimiters.ChoseDelimitersPanel
 
setDefenition(String) - Method in class pt.uminho.anote2.datastructures.resources.ontology.loaders.OntologicalClass
 
setDelay(int) - Method in class org.jdesktop.swingx.JXBusyLabel
 
setDelegateRenderer(ListCellRenderer) - Method in class org.jdesktop.swingx.JXList.DelegatingRenderer
Sets the delegate.
setDelegateRenderer(TreeCellRenderer) - Method in class org.jdesktop.swingx.JXTree.DelegatingRenderer
Sets the delegate.
setDelimiter(Delimiter) - Method in class pt.uminho.anote2.datastructures.utils.generic.ColumnParameters
 
setDescription(String) - Method in class org.jdesktop.swingx.JXHeader
Sets the description for this header.
setDescription(String) - Method in class pt.uminho.anote2.aibench.corpus.operations.CreateCorpusOperationByPublicationManager
 
setDescriptionFont(Font) - Method in class org.jdesktop.swingx.JXHeader
Sets font for the description line of header.
setDescriptionForeground(Color) - Method in class org.jdesktop.swingx.JXHeader
Sets description foreground color.
setDescriptionLabelFont(Font) - Method in class pt.uminho.generic.wizard2.WizardStepPanel
 
setDescriptionLabelText(String) - Method in class pt.uminho.generic.wizard2.WizardStepPanel
 
setDicDest(DictionaryAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.MergeDictionary
 
setDicionaries(Dictionaries) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.CreateDictionary
 
setDicionaries(DictionaryAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UploadDicionary
 
setDicionaries(LexicalWordsAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.AddTermToLexicalWords
 
setDicionaries(LexicalWordsSet) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.CreateLexicalWords
 
setDicionaries(LookupTableAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.AddTermToLookupTable
 
setDicionaries(LookupTables) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.CreateLookupTable
 
setDicionaries(Ontologies) - Method in class pt.uminho.anote2.aibench.resources.operations.ontologies.CreateOntology
 
setDicionaries(RulesSet) - Method in class pt.uminho.anote2.aibench.resources.operations.rules.CreateRulesSet
 
setDicionaries(RulesAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.rules.NewRule
 
setDicionariesDest(LexicalWordsAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.MergeLexicalWords
 
setDicionariesSource(LexicalWordsAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.MergeLexicalWords
 
setDicSource(DictionaryAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.MergeDictionary
 
setDictionary(DictionaryAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.LoadDictionaryCSV
 
setDictionary(IDictionary) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.Biowarehouse.Loader
 
setDictionary(List<IEntityAnnotation>) - Method in class pt.uminho.anote2.ner.ner.NER
 
setDictionaryView(DictionaryView) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.DictionarySearchOperation
 
setDirection(JXBusyLabel.Direction) - Method in class org.jdesktop.swingx.JXBusyLabel
Sets direction of rotation.
setDirection(JXCollapsiblePane.Direction) - Method in class org.jdesktop.swingx.JXCollapsiblePane
Changes the direction of this collapsible pane.
setDirection(JXBusyLabel.Direction) - Method in class org.jdesktop.swingx.painter.BusyPainter
Sets new spinning direction.
setDirectionality(int) - Method in interface pt.uminho.anote2.process.IE.re.clue.IVerbInfo
0 - LeftToRight 1 - RightToLeft 2 - Unknown 3 - Both
setDirectionality(int) - Method in class pt.uminho.anote2.process.IE.re.VerbInfo
 
setDirectionally(int) - Method in interface pt.uminho.anote2.core.annotation.IEventProperties
 
setDirectionally(int) - Method in class pt.uminho.anote2.datastructures.annotation.re.EventProperties
 
setDismissOnClick(boolean) - Method in class org.jdesktop.swingx.JXGlassBox
Configures the glass box to dismiss (or not) when clicked.
setDisplayedMnemonicIndex(int) - Method in class org.jdesktop.swingx.JXTaskPane
Provides a hint to the look and feel as to which character in the text should be decorated to represent the mnemonic.
setDividerPainter(JXMultiSplitPane.DividerPainter) - Method in class org.jdesktop.swingx.JXMultiSplitPane
Sets the DividerPainter that's used to paint Dividers on this MultiSplitPane.
setDividerSize(int) - Method in class org.jdesktop.swingx.JXMultiSplitPane
A convenience method that sets the MultiSplitLayout dividerSize property.
setDividerSize(int) - Method in class org.jdesktop.swingx.MultiSplitLayout
Sets the width of Dividers in Split rows, and the height of Dividers in Split columns.
setDLookupTable(LexicalWordsAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.SaveLexicalWordsCSV
 
setDLookupTable(LookupTableAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.SaveLookupTableCSV
 
setDocs(Set<Integer>) - Method in class pt.uminho.anote2.aibench.corpus.operations.CreateCorpusOperationByPublicationManager
 
setDocsDir(File) - Method in class pt.uminho.anote2.aibench.curator.documentstructuring.DocumentStructuring
 
setDocument(ANoteDocument) - Method in class pt.uminho.anote2.aibench.curator.datastructures.AiANoteDocument
 
setDocumentColor() - Method in class pt.uminho.anote2.aibench.corpus.operations.ChangeClassColorDocumentsOperation
 
setDocumentColor() - Method in class pt.uminho.anote2.aibench.corpus.operations.ChangeVerbBackgroundColorOperation
 
setDocuments(Set<IPublication>) - Method in interface pt.uminho.anote2.core.corpora.ICorpusCreateConfiguration
 
setDocuments(IDocumentSet) - Method in class pt.uminho.anote2.corpusloaders.loaders.ANoteCorpusLoader
 
setDocuments(IDocumentSet) - Method in class pt.uminho.anote2.corpusloaders.loaders.GeniaEventCorpusLoader
 
setDocuments(File) - Method in class pt.uminho.anote2.corpusloaders.operations.CreateCorpusByAIMEDProteinCorpus
 
setDocuments(File) - Method in class pt.uminho.anote2.corpusloaders.operations.CreateCorpusByAnotev1Corpus
 
setDocuments(File) - Method in class pt.uminho.anote2.corpusloaders.operations.CreateCorpusByGeniaEventCorpus
 
setDocuments(Set<IPublication>) - Method in class pt.uminho.anote2.datastructures.corpora.CorpusCreateConfiguration
 
setDocuments(IDocumentSet) - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedCrawl
 
setDocuments(IDocumentSet) - Method in class pt.uminho.anote2.relation.core.gate.RelationsExtraction
 
setDocumentStructure(ANoteDocumentStructure) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocument
 
setDocumentStructure(ANoteDocumentStructure) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentData
 
setDocumentText(ANoteDocumentText) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocument
 
setDocumentText(ANoteDocumentText) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentData
 
setDocumentText(ANoteDocumentText) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentPreviousData
 
setDocumentText(String) - Method in class pt.uminho.anote2.aibench.curator.documentstructuring.SearchPieces
 
setDoubleBufferingEnabled(boolean) - Method in class org.jdesktop.swingx.ForwardingRepaintManager
setDoubleBufferMaximumSize(Dimension) - Method in class org.jdesktop.swingx.ForwardingRepaintManager
setDownIcon(Icon) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setDownloaded_publications(int) - Method in class pt.uminho.anote2.datastructures.documents.query.QueryInformationRetrieval
 
setDragEnabled(boolean) - Method in class org.jdesktop.swingx.JXImageView
Sets the dragEnabled property, which determines whether or not the user can drag images out of the image view and into other components or application.
setDraggedDistance(int) - Method in class org.jdesktop.swingx.JXTableHeader
Overridden to scroll the table to keep the dragged column visible.
setDriverClassName(String) - Method in interface pt.uminho.anote2.core.database.IDatabase
Method that change driver database
setDriverClassName(String) - Method in class pt.uminho.anote2.datastructures.database.ADatabase
 
setDropHackEnabled(boolean) - Method in class org.jdesktop.swingx.renderer.WrappingIconPanel
Sets the dropHackEnabled property.
setEdgeColor(Color) - Method in class org.jdesktop.swingx.painter.effects.NeonBorderEffect
Set the edge color
setEditable(boolean) - Method in class org.jdesktop.swingx.JXDatePicker
Sets the editable property.
setEditable(boolean) - Method in class org.jdesktop.swingx.JXImagePanel
 
setEditable(boolean) - Method in class org.jdesktop.swingx.JXImageView
Sets whether or not the user can drag images.
setEditable(boolean) - Method in interface org.jdesktop.swingx.JXLoginPane.NameComponent
 
setEditable(boolean) - Method in class org.jdesktop.swingx.JXTable
Sets the editable property.
setEditable(boolean) - Method in class org.jdesktop.swingx.table.TableColumnExt
Sets the editable property.
setEditor(JFormattedTextField) - Method in class org.jdesktop.swingx.JXDatePicker
Sets the editor.
setEditorKit(EditorKit) - Method in class org.jdesktop.swingx.JXEditorPane
Overidden to perform document initialization based on type.
setEditPanel(JEditorPane) - Method in class pt.uminho.anote2.aibench.curator.menu.externallinks.ExternalLinksMenu
 
setEffectWidth(int) - Method in class org.jdesktop.swingx.painter.effects.AbstractAreaEffect
Setter for property effectWidth.
setEnableBackButton(boolean) - Method in class pt.uminho.anote2.aibench.utils.wizard.SimpleDialogView
 
setEnableBackButton(boolean) - Method in class pt.uminho.generic.wizard2.Wizard
 
setEnabled(Object, boolean) - Method in class org.jdesktop.swingx.action.ActionManager
Enables or disables the state of the Action corresponding to the action id.
setEnabled(boolean) - Method in class org.jdesktop.swingx.decorator.DefaultSelectionMapper
Toggle whether selection mapping is active.
setEnabled(boolean) - Method in interface org.jdesktop.swingx.decorator.SelectionMapper
Toggle whether selection mapping is active.
setEnabled(boolean) - Method in class org.jdesktop.swingx.JXGraph
setEnabled(boolean) - Method in interface org.jdesktop.swingx.JXLoginPane.NameComponent
 
setEnabled(boolean) - Method in class org.jdesktop.swingx.JXRadioGroup
Enable/disable all of the child buttons
setEnabled(boolean) - Method in class org.jdesktop.swingx.JXTreeTable
Overridden to keep the tree's enabled in synch.
setEnabled(boolean) - Method in class org.jdesktop.swingx.UIAction
 
setEnabled(boolean) - Method in class pt.uminho.generic.components.JSliderDouble
 
setEnabledOkButton(Boolean) - Method in class pt.uminho.anote2.aibench.utils.conf.propertiesmanager.OkCancelMiniPanel
 
setEnableDoneButton(boolean) - Method in class pt.uminho.anote2.aibench.utils.wizard.SimpleDialogView
 
setEnableNextButton(boolean) - Method in class pt.uminho.anote2.aibench.utils.wizard.SimpleDialogView
 
setEnableNextButton(boolean) - Method in class pt.uminho.generic.wizard2.Wizard
 
setEnableRemove(boolean) - Method in class pt.uminho.generic.components.table.tableremover.TableModelColumnRemover
 
setEnd(int) - Method in class pt.uminho.anote2.datastructures.annotation.AnnotationPosition
 
setEndOffset(long) - Method in class pt.uminho.anote2.datastructures.annotation.Annotation
 
setEntities(List<IEntityAnnotation>) - Method in class pt.uminho.anote2.datastructures.documents.AnnotatedDocument
 
setEntitiesAtLeft(List<IEntityAnnotation>) - Method in class pt.uminho.anote2.datastructures.annotation.re.EventAnnotation
 
setEntitiesAtRight(List<IEntityAnnotation>) - Method in class pt.uminho.anote2.datastructures.annotation.re.EventAnnotation
 
setEntity(Set<String>) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UpdateDictionaryBiowareHouse
 
setEntity(String) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UploadDicionary
 
setEntityClass(String) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.DictionaryLoaderHelp
 
setEntityRelations(SortedMap<AnnotationPosition, Set<IEventAnnotation>>) - Method in class pt.uminho.anote2.aibench.corpus.datatypes.REDocumentAnnotation
 
setErrorDescription(String) - Method in class pt.uminho.generic.operation.OperationErrorGUI
 
setErrorInfo(ErrorInfo) - Method in class org.jdesktop.swingx.JXErrorPane
Sets the ErrorInfo for this dialog.
setErrorMessage(String) - Method in class org.jdesktop.swingx.JXLoginPane
Sets the error message for this login panel
setErrorReporter(ErrorReporter) - Method in class org.jdesktop.swingx.JXErrorPane
Sets the ErrorReporter delegate to use.
setEventClue(String) - Method in class pt.uminho.anote2.datastructures.annotation.re.EventAnnotation
 
setEvents(List<IEventAnnotation>) - Method in class pt.uminho.anote2.datastructures.documents.AnnotatedDocument
 
setExpandedIcon(Icon) - Method in class org.jdesktop.swingx.JXTree
Sets the Icon to use for the handle of an expanded node.
setExpandedIcon(Icon) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the specified icon as the icon to use for rendering expanded nodes.
setExpandsSelectedPaths(boolean) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the value of the expandsSelectedPaths property for the tree part.
setExportFormat(String) - Method in class org.jdesktop.swingx.JXImageView
 
setExportName(String) - Method in class org.jdesktop.swingx.JXImageView
 
setExtent(double) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
Sets the sizeModel's extent.
setExtent(int) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
setExtent(double) - Method in interface pt.uminho.generic.components.DoubleBoundedRangeModel
Sets the sizeModel's extent.
setFieldName(String) - Method in class org.jdesktop.swingx.JXSearchPanel
set the label of the search combo.
setfile(File) - Method in class pt.uminho.anote2.aibench.corpus.operations.ExportRESchemaToXGMMLOperation
 
setfile(File) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.LoadDictionaryCSV
 
setfile(File) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.LoadLexicalWordsCSV
 
setfile(File) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.SaveLexicalWordsCSV
 
setfile(File) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.LoadLookupTableCSV
 
setfile(File) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.SaveLookupTableCSV
 
setFile(File) - Method in class pt.uminho.anote2.aibench.resources.operations.ontologies.LoadOBOOntologyv1p0
 
setFile(File) - Method in class pt.uminho.anote2.aibench.resources.operations.ontologies.LoadOBOOntologyv1p2
 
setFilepath(String) - Method in class pt.uminho.anote2.aibench.corpus.structures.PDF
 
setFilepath(String) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PDF
 
setFillHorizontal(boolean) - Method in class org.jdesktop.swingx.painter.AbstractLayoutPainter
Sets if the content should be stretched horizontally to fill all available horizontalAlignment space (minus the left and right insets).
setFillPaint(Paint) - Method in class org.jdesktop.swingx.painter.AbstractAreaPainter
Sets the Paint to use.
setFillsViewportHeight(boolean) - Method in class org.jdesktop.swingx.JXTable
Sets the flag which controls the scrollableTracksViewportHeight property.
setFillVertical(boolean) - Method in class org.jdesktop.swingx.painter.AbstractLayoutPainter
Sets if the content should be stretched vertically to fill all available verticalAlignment space (minus the top and bottom insets).
setFilterEnabled(boolean) - Method in class org.jdesktop.swingx.JXList
Enables/disables filtering support.
setFilters(FilterPipeline) - Method in class org.jdesktop.swingx.decorator.DefaultSelectionMapper
 
setFilters(FilterPipeline) - Method in interface org.jdesktop.swingx.decorator.SelectionMapper
Install the new filter pipeline and map the newly filtered data towards the view.
setFilters(FilterPipeline) - Method in class org.jdesktop.swingx.decorator.SizeSequenceMapper
 
setFilters(FilterPipeline) - Method in class org.jdesktop.swingx.JXList
Sets the FilterPipeline for filtering the items of this list, maybe null to remove all previously applied filters.
setFilters(FilterPipeline) - Method in class org.jdesktop.swingx.JXTable
Sets the FilterPipeline for filtering table rows, maybe null to remove all previously applied filters.
setFilters(FilterPipeline) - Method in class org.jdesktop.swingx.JXTreeTable
overridden to do nothing.
setFilters(BufferedImageOp...) - Method in class org.jdesktop.swingx.painter.AbstractPainter
A convenience method for specifying the filters to use based on BufferedImageOps.
setFinishing(boolean) - Method in class pt.uminho.anote2.datastructures.report.Report
 
setFirst() - Method in class pt.uminho.anote2.aibench.publicationmanager.datatypes.QueryInformationRetrievalExtension
 
setFirstDayOfWeek(int) - Method in class org.jdesktop.swingx.calendar.AbstractDateSelectionModel
Sets what the first day of the week is.
setFirstDayOfWeek(int) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Sets what the first day of the week is.
setFirstDayOfWeek(int) - Method in class org.jdesktop.swingx.JXMonthView
Sets what the first day of the week is; e.g., Calendar.SUNDAY in US, Calendar.MONDAY in France.
setFirstDisplayedDay(Date) - Method in class org.jdesktop.swingx.JXMonthView
Set the first displayed date.
setFirstWords(int) - Method in class pt.uminho.anote2.aibench.curator.documentstructuring.PieceToSearch
 
setFirstWords(int) - Method in class pt.uminho.anote2.datastructures.textprocessing.documentStructure.PieceToSearch
 
setFixedWidth(int) - Method in class org.jdesktop.swingx.JXStatusBar.Constraint
Set the fixed width the component added with this constraint will occupy on the JXStatusBar.
setFlaggedDates(Date...) - Method in class org.jdesktop.swingx.JXMonthView
Replace all flags with the given dates.
setFlaggedDayForeground(Color) - Method in class org.jdesktop.swingx.JXMonthView
Set the color to be used for painting the foreground of a flagged day.
setFloatingDividers(boolean) - Method in class org.jdesktop.swingx.MultiSplitLayout
If true, Leaf node bounds match the corresponding component's preferred size and Splits/Dividers are resized accordingly.
setFont(Font) - Method in class org.jdesktop.swingx.JXDatePicker
Set the font for the editor associated with this date picker.
setFont(Font) - Method in class org.jdesktop.swingx.JXHeader
Sets new font for both, title and description line of the header.
setFont(Font) - Method in class org.jdesktop.swingx.JXTitledSeparator
setFont(Font) - Method in class org.jdesktop.swingx.painter.TextPainter
Set the font (and font size and style) to be used when drawing the text
setFont(Font) - Method in class org.jdesktop.swingx.renderer.WrappingIconPanel
Overridden to set the Font of the delegate as well.
setFont(Font) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setFont(Container, Font) - Static method in class org.jdesktop.swingx.util.PaintUtils
Deprecated. (pre 0.9.6) use SwingXUtilities.setComponentTreeFont(Component, Font)
setFontRecursively(Container, Font) - Static method in class org.jdesktop.swingx.util.WindowUtils
Deprecated. (pre-0.9.6) use SwingXUtilities.setComponentTreeFont(Component, Font)
setForeground(Color) - Method in class org.jdesktop.swingx.decorator.ColorHighlighter
Sets the foreground color of this ColorHighlighter and notifies registered ChangeListeners.
setForeground(Color) - Method in class org.jdesktop.swingx.JXTitledSeparator
setForeground(Color) - Method in class org.jdesktop.swingx.renderer.AbstractRenderer
 
setForeground(Color) - Method in class org.jdesktop.swingx.renderer.DefaultVisuals
Sets the renderer's unselected-foreground color to the specified color.
setForeground(Color) - Method in class org.jdesktop.swingx.renderer.WrappingIconPanel
Overridden to set the foreground of the delegate and icon label as well.
setForeground(Color) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setForegroundColor(Container, Color) - Static method in class org.jdesktop.swingx.util.PaintUtils
Deprecated. (pre 0.9.6) use SwingXUtilities.setComponentTreeForeground(Component, Color)
setForegroundPainter(Painter<JXButton>) - Method in class org.jdesktop.swingx.JXButton
 
setForegroundPainter(Painter) - Method in class org.jdesktop.swingx.JXLabel
Sets a new foregroundPainter on the label.
setFormats(String...) - Method in class org.jdesktop.swingx.JXDatePicker
Replaces the currently installed formatter and factory used by the editor.
setFormats(DateFormat...) - Method in class org.jdesktop.swingx.JXDatePicker
Replaces the currently installed formatter and factory used by the editor.
setFormats(DateFormat...) - Method in class org.jdesktop.swingx.table.DatePickerCellEditor
 
setFoundIndex(int) - Method in class org.jdesktop.swingx.search.PatternModel
 
setFrame(int) - Method in class org.jdesktop.swingx.painter.BusyPainter
Sets current frame.
setFromPubmedSearch(boolean) - Method in class pt.uminho.anote2.datastructures.documents.query.QueryInformationRetrieval
 
setFullTExt(String) - Method in interface pt.uminho.anote2.core.document.IDocument
 
setFullTExt(String) - Method in class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
setFullTExtOnDatabase(String) - Method in interface pt.uminho.anote2.core.document.IDocument
 
setFullTExtOnDatabase(String) - Method in class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
setGap(int) - Method in class org.jdesktop.swingx.HorizontalLayout
 
setGap(int) - Method in class org.jdesktop.swingx.VerticalLayout
 
setGateDoc(Document) - Method in class pt.uminho.anote2.relation.gate.Gate7PosTagger
 
setGateDoc(Document) - Method in interface pt.uminho.gate.process.IGatePosTagger
 
setGeneralDelimiter(Delimiter) - Method in class pt.uminho.anote2.datastructures.utils.generic.CSVFileConfigurations
 
setGeneralProperty(String, Object) - Method in interface pt.uminho.anote2.core.annotation.IEventProperties
 
setGeneralProperty(String, Object) - Method in class pt.uminho.anote2.datastructures.annotation.re.EventProperties
 
setGradient() - Method in class org.jdesktop.swingx.color.GradientPreviewPanel
 
setGradient(MultipleGradientPaint) - Method in class org.jdesktop.swingx.color.GradientPreviewPanel
 
setGradient(MultipleGradientPaint) - Method in class org.jdesktop.swingx.JXGradientChooser
Sets the gradient within this panel to the new gradient.
setGradientType(GradientType) - Method in class pt.uminho.generic.components.gradientpanel.GradientGUI
 
setGridColor(Color) - Method in class org.jdesktop.swingx.JXTable
Overridden because super throws NPE on null param.
setGridPainted(boolean) - Method in class org.jdesktop.swingx.JXGraph
Enables or disables the painting of grid lines depending on the value of the parameter.
setGroup(Object) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Sets the group identity of the state action.
setHeaderPanelTitleText(String) - Method in class pt.uminho.generic.wizard2.WizardStepPanel
 
setHeaderPanelTitleTextFont(Font) - Method in class pt.uminho.generic.wizard2.WizardStepPanel
 
setHighlightColor(Color) - Method in class org.jdesktop.swingx.painter.BusyPainter
Sets new highlight color.
setHighlighters(Highlighter...) - Method in class org.jdesktop.swingx.decorator.CompoundHighlighter
Sets the given Highlighters.
setHighlighters(Highlighter...) - Method in class org.jdesktop.swingx.JXList
Sets the Highlighters to the table, replacing any old settings.
setHighlighters(Highlighter...) - Method in class org.jdesktop.swingx.JXTable
Sets the Highlighters to the table, replacing any old settings.
setHighlighters(Highlighter...) - Method in class org.jdesktop.swingx.JXTree
Sets the Highlighters to the table, replacing any old settings.
setHighlighters(Highlighter...) - Method in class org.jdesktop.swingx.table.TableColumnExt
Sets the Highlighters to the table, replacing any old settings.
setHighlightPredicate(HighlightPredicate) - Method in class org.jdesktop.swingx.decorator.AbstractHighlighter
Set the HighlightPredicate used to decide whether a cell should be highlighted.
setHighValue(double) - Method in class pt.uminho.generic.components.JSliderDouble
Sets the high value shown by this range slider.
setHorizontalAlignment(int) - Method in class org.jdesktop.swingx.JXTitledSeparator
Sets the alignment of the title along the X axis.
setHorizontalAlignment(AbstractLayoutPainter.HorizontalAlignment) - Method in class org.jdesktop.swingx.painter.AbstractLayoutPainter
Sets a new horizontalAlignment alignment.
setHorizontalAlignment(int) - Method in class org.jdesktop.swingx.renderer.ComponentProvider
Sets the horizontal alignment property to configure the component with.
setHorizontalAlignment(int) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setHorizontalRepeat(boolean) - Method in class org.jdesktop.swingx.painter.ImagePainter
Sets if the image should be repeated horizontally.
setHorizontalScrollEnabled(boolean) - Method in class org.jdesktop.swingx.JXTable
Sets the enablement of enhanced horizontal scrolling.
setHorizontalTextPosition(int) - Method in class org.jdesktop.swingx.JXTitledSeparator
Sets the horizontal position of the title's text, relative to the icon.
setHorizontalTextPosition(int) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setHost(String) - Method in class pt.uminho.anote2.datastructures.database.ADatabase
 
setHtmlFont(HTMLDocument, Font) - Static method in class org.jdesktop.swingx.SwingXUtilities
Sets the font used for HTML displays to the specified font.
setHtmlText(String) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentText
 
setIcon(Icon) - Method in class org.jdesktop.swingx.border.IconBorder
Sets the icon for this border.
setIcon(Icon) - Method in class org.jdesktop.swingx.decorator.IconHighlighter
Sets the icon to use for decoration.
setIcon(Icon) - Method in class org.jdesktop.swingx.JXErrorPane
Specifies the icon to use
setIcon(Icon) - Method in class org.jdesktop.swingx.JXHeader
Sets the icon to use for the header.
setIcon(Icon) - Method in class org.jdesktop.swingx.JXTaskPane
Sets the icon to be displayed in the border of this pane.
setIcon(Icon) - Method in class org.jdesktop.swingx.JXTitledSeparator
Defines the icon this component will display.
setIcon(Icon) - Method in class org.jdesktop.swingx.renderer.WrappingIconPanel
Sets the icon.
setIcon(Icon) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setIcon(ImageIcon) - Method in class pt.uminho.anote2.datastructures.utils.MenuItem
 
setIconPosition(int) - Method in class org.jdesktop.swingx.border.IconBorder
Sets the position to place the icon (relative to the component contents).
setIconPosition(JXHeader.IconPosition) - Method in class org.jdesktop.swingx.JXHeader
Sets new Icon position.
setIconTextGap(int) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setId(String) - Method in class pt.uminho.anote2.aibench.corpus.utils.ANoteAnnotation
 
setId(int) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteAnnotation
 
setID(int) - Method in interface pt.uminho.anote2.core.document.IDocument
 
setID(int) - Method in class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
setId(int) - Method in class pt.uminho.anote2.datastructures.utils.MenuItem
 
setIdentifiersClass(Class<?>) - Method in class es.uvigo.ei.sing.BioSearch.datatypes.CollectionResult
 
setIdle(boolean) - Method in class org.jdesktop.swingx.JXFrame
 
setIdleThreshold(long) - Method in class org.jdesktop.swingx.JXFrame
 
setIdQuery(int) - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedSearch
 
setIdsentence(Pattern) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.NcbiTaxonomy
 
setIEProcess(IIEProcess) - Method in class pt.uminho.anote2.aibench.ner.operations.OperationApplySameNERAnote
 
setImage(Image) - Method in class org.jdesktop.swingx.JXImagePanel
Sets the image to use for the background of this panel.
setImage(Image) - Method in class org.jdesktop.swingx.JXImageView
Sets the current image.
setImage(URL) - Method in class org.jdesktop.swingx.JXImageView
Set the current image to an image pointed to by this URL.
setImage(File) - Method in class org.jdesktop.swingx.JXImageView
Set the current image to an image pointed to by this File.
setImage(BufferedImage) - Method in class org.jdesktop.swingx.painter.ImagePainter
Sets the image to paint with.
setImageLoader(Callable<Image>) - Method in class org.jdesktop.swingx.JXImagePanel
 
setImageLocation(Point2D) - Method in class org.jdesktop.swingx.JXImageView
Set the current image location.
setImageScale(double) - Method in class org.jdesktop.swingx.painter.ImagePainter
Sets the scaling factor used when drawing the image
setImageString(String) - Method in class org.jdesktop.swingx.JXImageView
Sets the current image using a string.
setImageString(String) - Method in class org.jdesktop.swingx.painter.ImagePainter
Used by the persistence mechanism.
setImageURL(URL) - Method in class org.jdesktop.swingx.JXImageView
 
setIncremental(boolean) - Method in class org.jdesktop.swingx.search.PatternModel
 
setInfo(String) - Method in class pt.uminho.anote2.aibench.resources.datatypes.DictionaryAibench
 
setInfo(String) - Method in class pt.uminho.anote2.aibench.resources.datatypes.LexicalWordsAibench
 
setInfo(String) - Method in class pt.uminho.anote2.datastructures.resources.ResourcesHelp
 
setInfo(String) - Method in class pt.uminho.generic.genericpanel.view.JPanelWait
 
setInformation(String) - Method in class pt.uminho.generic.genericpanel.database.DataBaseDelete
 
setInheritAlpha(boolean) - Method in class org.jdesktop.swingx.JXPanel
 
setInitial_props(Map<String, Object>) - Method in class pt.uminho.anote2.aibench.ner.settings.pane.NERLexicalResourcesChangeSettingsPanel
 
setInitial_props(Map<String, Object>) - Method in class pt.uminho.anote2.relation.settings.pane.RERelationChangeSettingsPanel
 
setInner(boolean) - Method in class org.jdesktop.swingx.decorator.BorderHighlighter
Sets the inner property.
setInnerRadius(double) - Method in class org.jdesktop.swingx.geom.Star2D
Sets the inner radius of the star, that is the distance between its center and the origin of the branches.
setInputEnabled(boolean) - Method in class org.jdesktop.swingx.JXGraph
Enables or disables user input on the component.
setInsets(Insets) - Method in class org.jdesktop.swingx.painter.AbstractLayoutPainter
Sets the current whitespace insets.
setInstance(ActionManager) - Static method in class org.jdesktop.swingx.action.ActionManager
Sets the ActionManager instance.
setInstance(SearchFactory) - Static method in class org.jdesktop.swingx.search.SearchFactory
Sets the shared SearchFactory.
setInstance(ColumnFactory) - Static method in class org.jdesktop.swingx.table.ColumnFactory
Sets the shared default factory.
setInterpolation(AbstractPainter.Interpolation) - Method in class org.jdesktop.swingx.painter.AbstractPainter
Sets a new value for the interpolation setting.
setIs_a(List<String>) - Method in class pt.uminho.anote2.datastructures.resources.ontology.loaders.OntologicalClass
 
setIsfreefulltextquery(boolean) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
setIsfreefulltextquery(boolean) - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedSearch
 
setIssue(String) - Method in class pt.uminho.anote2.datastructures.documents.Publication
 
setItem(Object) - Method in class org.jdesktop.swingx.autocomplete.AutoCompleteComboBoxEditor
 
setJButtonHelpEnable(boolean) - Method in class pt.uminho.anote2.aibench.utils.wizard.SimpleDialogView
 
setJMenuBar(JMenuBar) - Method in class org.jdesktop.swingx.JXRootPane
Set the menu bar for this root pane.
setJournal(String) - Method in class pt.uminho.anote2.datastructures.documents.Publication
 
setKeyPreview(boolean) - Method in class org.jdesktop.swingx.JXFrame
 
setKeywords(String) - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.PubmedSearchOperation
 
setKeywords(String) - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedSearch
 
setLargeIcon(Icon) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Sets the large icon which represents the action.
setLargeModel(boolean) - Method in class org.jdesktop.swingx.JXTreeTable
Specifies whether the UI should use a large model.
setLastWords(int) - Method in class pt.uminho.anote2.aibench.curator.documentstructuring.PieceToSearch
 
setLastWords(int) - Method in class pt.uminho.anote2.datastructures.textprocessing.documentStructure.PieceToSearch
 
setLayout(LayoutManager) - Method in class org.jdesktop.swingx.JXCollapsiblePane
Overriden to redirect call to the content pane.
setLayout(LayoutManager) - Method in class org.jdesktop.swingx.JXRootPane
 
setLayout(LayoutManager) - Method in class org.jdesktop.swingx.JXTaskPane
Overridden to redirect call to the content pane.
setLayoutAxis(int) - Method in class org.jdesktop.swingx.JXRadioGroup
Set the layout axis of the radio group.
setLayoutByWeight(boolean) - Method in class org.jdesktop.swingx.MultiSplitLayout
Sset the layoutByWeight falg.
setLayoutMode(int) - Method in class org.jdesktop.swingx.MultiSplitLayout
Set the layout mode.
setLeafIcon(Icon) - Method in class org.jdesktop.swingx.JXTree.DelegatingRenderer
 
setLeafIcon(Icon) - Method in class org.jdesktop.swingx.JXTree
Sets the Icon to use for a leaf node.
setLeafIcon(Icon) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the specified icon as the icon to use for rendering leaf nodes.
setLeftDecoration(JComponent) - Method in class org.jdesktop.swingx.JXTitledPanel
Adds the given JComponent as a decoration on the left of the title
setLeftDecoration(JComponent) - Method in class org.jdesktop.swingx.plaf.basic.BasicTitledPanelUI
Adds the given JComponent as a decoration on the left of the title
setLeftDecoration(JComponent) - Method in class org.jdesktop.swingx.plaf.TitledPanelUI
Adds the given JComponent as a decoration on the left of the title
setLemma(String) - Method in class pt.uminho.anote2.aibench.corpus.utils.ANoteAnnotation
 
setLemma(String) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteAnnotation
 
setLemma(String) - Method in interface pt.uminho.anote2.core.annotation.IEventProperties
 
setLemma(String) - Method in class pt.uminho.anote2.datastructures.annotation.re.EventProperties
 
setLemma(String) - Method in interface pt.uminho.anote2.process.IE.re.clue.IVerbInfo
 
setLemma(String) - Method in class pt.uminho.anote2.process.IE.re.VerbInfo
 
setLength(float) - Method in class org.jdesktop.swingx.graphics.ReflectionRenderer
Sets the length of the reflection, as a fraction of the height of the source image.
setLevel(int) - Method in class pt.uminho.anote2.datastructures.utils.MenuItem
 
setLexicalWords(Set<String>) - Method in class pt.uminho.anote2.datastructures.resources.lexiacalwords.LexicalWords
 
setLightPaint(Paint) - Method in class org.jdesktop.swingx.painter.CheckerboardPainter
Specifies the paint to use for light tiles.
setLightWeightPopupEnabled(boolean) - Method in class org.jdesktop.swingx.JXDatePicker
Sets the lightWeightPopupEnabled property, which provides a hint as to whether or not a lightweight Component should be used to contain the JXDatePicker, versus a heavyweight Component such as a Panel or a Window.
setLineWrap(boolean) - Method in class org.jdesktop.swingx.JXLabel
Enables line wrapping support for plain text.
setLinkAction(AbstractHyperlinkAction) - Method in class org.jdesktop.swingx.renderer.HyperlinkProvider
Sets the LinkAction for handling the values.
setLinkAction(AbstractHyperlinkAction, Class) - Method in class org.jdesktop.swingx.renderer.HyperlinkProvider
Sets the LinkAction for handling the values and the class the action can handle.
setLinkDay(Date, String) - Method in class org.jdesktop.swingx.JXDatePicker
Set the date the link will use and the string defining a MessageFormat to format the link.
setLinkDay(Date) - Method in class org.jdesktop.swingx.JXDatePicker
Sets the date shown in the TodayPanel.
setLinkPanel(JPanel) - Method in class org.jdesktop.swingx.JXDatePicker
Set the panel that will be used at the bottom of the popup.
setListOFPmid(List<IPublication>) - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.JournalRetrivalListDocs
 
setLocale(Locale) - Method in class org.jdesktop.swingx.AbstractPatternPanel
Overridden to update locale-dependent properties.
setLocale(Locale) - Method in class org.jdesktop.swingx.calendar.AbstractDateSelectionModel
Sets the Locale of this model's calendar.
setLocale(Locale) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Sets the Locale of this model's calendar.
setLocale(Locale) - Method in class org.jdesktop.swingx.JXDialog
Overridden to set the content's Locale and then updated this dialog's internal state.
setLocale(Locale) - Method in class org.jdesktop.swingx.JXLoginPane
 
setLocale(Locale) - Method in class org.jdesktop.swingx.JXMonthView
Sets locale and resets text and format used to display months and days.
setLocale(Locale) - Method in class org.jdesktop.swingx.JXTable
Overridden to update locale-dependent properties.
setLocale(Locale) - Method in interface org.jdesktop.swingx.plaf.basic.CalendarRenderingHandler
Updates internal state to the given Locale.
setLogicalStyle(int, Style) - Method in class org.jdesktop.swingx.autocomplete.AutoCompleteStyledDocument
setLoginService(LoginService) - Method in class org.jdesktop.swingx.JXLoginPane
Sets the LoginService for this panel.
setLongDescription(String) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Sets the long description of the action.
setLookupTable(LookupTable) - Method in class pt.uminho.anote2.aibench.curator.view.ANoteDocumentView
 
setLookupTable(IResource<IResourceElement>) - Method in class pt.uminho.anote2.aibench.curator.view.REANoteDocumentView
 
setLookupTable(LexicalWordsAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.LoadLexicalWordsCSV
 
setLookupTable(LookupTableAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.LoadLookupTableCSV
 
setLowerBound(Date) - Method in class org.jdesktop.swingx.calendar.AbstractDateSelectionModel
Set the lower bound date that is allowed to be selected for this model.
setLowerBound(Date) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Set the lower bound date that is allowed to be selected for this model.
setLowerBound(Date) - Method in class org.jdesktop.swingx.JXMonthView
Set the lower bound date that is allowed to be selected.
setLowValue(double) - Method in class pt.uminho.generic.components.JSliderDouble
Sets the low value shown by this range slider.
setLTDest(LookupTableAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.MergeLookupTable
 
setLTSource(LookupTableAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.MergeLookupTable
 
setMainPanelBorder(Border) - Method in class pt.uminho.generic.wizard2.WizardStepPanel
 
setMainTable(JTable) - Method in class pt.uminho.generic.genericpanel.tablesearcher.TableSearchPanel
 
setMainTerm(String) - Method in class pt.uminho.anote2.aibench.corpus.gui.help.treenodes.EntityTreeNode
 
setMajorGridColor(Color) - Method in class org.jdesktop.swingx.JXGraph
Sets the color of major grid lines on this component.
setMajorX(double) - Method in class org.jdesktop.swingx.JXGraph
Sets the distance, in graph units, between two major grid lines on the X axis.
setMajorY(double) - Method in class org.jdesktop.swingx.JXGraph
Sets the distance, in graph units, between two major grid lines on the Y axis.
setMatchHighlighter(AbstractHighlighter) - Method in class org.jdesktop.swingx.search.AbstractSearchable
Sets the AbstractHighlighter to use as match marker, if enabled.
setMatching_publications(int) - Method in class pt.uminho.anote2.datastructures.documents.query.QueryInformationRetrieval
 
setMatchRule(String) - Method in class org.jdesktop.swingx.search.PatternModel.RegexCreator
 
setMatchRule(String) - Method in class org.jdesktop.swingx.search.PatternModel
 
setMaximum(double) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
Sets the sizeModel's maximum to newMaximum.
setMaximum(int) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
setMaximum(double) - Method in interface pt.uminho.generic.components.DoubleBoundedRangeModel
Sets the sizeModel's maximum to newMaximum.
setMaximum(double) - Method in class pt.uminho.generic.components.JSliderDouble
Sets the maximum value of the doubleBoundedRangeModel.
setMaximumValue(float) - Method in class org.jdesktop.swingx.JXMultiThumbSlider
 
setMaximumValue(float) - Method in class org.jdesktop.swingx.multislider.AbstractMultiThumbModel
 
setMaximumValue(float) - Method in interface org.jdesktop.swingx.multislider.MultiThumbModel
 
setMaxLineSpan(int) - Method in class org.jdesktop.swingx.JXLabel
 
setMaxOfColumns(int) - Method in class pt.uminho.generic.genericpanel.tablesearcher.SelectColumnPanel
 
setMergedClip(Graphics, Shape) - Static method in class org.jdesktop.swingx.util.PaintUtils
Deprecated. (pre-0.9.6) Use GraphicsUtilities.mergeClip(Graphics,Shape) instead
setMessage(String) - Method in class org.jdesktop.swingx.JXLoginPane
Sets a custom message for this login panel
setMinimalDaysInFirstWeek(int) - Method in class org.jdesktop.swingx.calendar.AbstractDateSelectionModel
Sets the minimal number of days in the first week of the year.
setMinimalDaysInFirstWeek(int) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Sets the minimal number of days in the first week of the year.
setMinimum(double) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
Sets the sizeModel's minimum to newMinimum.
setMinimum(int) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
setMinimum(double) - Method in interface pt.uminho.generic.components.DoubleBoundedRangeModel
Sets the sizeModel's minimum to newMinimum.
setMinimum(double) - Method in class pt.uminho.generic.components.JSliderDouble
Sets the minimum value of the doubleBoundedRangeModel.
setMinimumSize(Dimension) - Method in class org.jdesktop.swingx.JXCollapsiblePane
Forwards to the content pane.
setMinimumSizeManager(Window, int, int) - Static method in class org.jdesktop.swingx.util.WindowUtils
Installs/resets a ComponentListener to resize the given window to minWidth/Height if needed.
setMinimumValue(float) - Method in class org.jdesktop.swingx.JXMultiThumbSlider
 
setMinimumValue(float) - Method in class org.jdesktop.swingx.multislider.AbstractMultiThumbModel
 
setMinimumValue(float) - Method in interface org.jdesktop.swingx.multislider.MultiThumbModel
 
setMinorCountX(int) - Method in class org.jdesktop.swingx.JXGraph
Sets the number of minor grid lines between two major grid lines on the X axis.
setMinorCountY(int) - Method in class org.jdesktop.swingx.JXGraph
Sets the number of minor grid lines between two major grid lines on the Y axis.
setMinorGridColor(Color) - Method in class org.jdesktop.swingx.JXGraph
Sets the color of minor grid lines on this component.
setMnemonic(String) - Method in class org.jdesktop.swingx.action.AbstractActionExt
 
setMnemonic(int) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Sets the mnemonic key code for the action.
setMnemonic(int) - Method in class org.jdesktop.swingx.JXTaskPane
Sets the keyboard mnemonic on the task pane.
setModel(ListModel) - Method in class org.jdesktop.swingx.JXList
Sets the underlying data model.
setModel(MultiSplitLayout.Node) - Method in class org.jdesktop.swingx.JXMultiSplitPane
A convenience method that sets the MultiSplitLayout model.
setModel(MultiThumbModel<E>) - Method in class org.jdesktop.swingx.JXMultiThumbSlider
 
setModel(TableModel) - Method in class org.jdesktop.swingx.JXTable
setModel(TipOfTheDayModel) - Method in class org.jdesktop.swingx.JXTipOfTheDay
 
setModel(TreeModel) - Method in class org.jdesktop.swingx.JXTree
Overridden to initialize the String conversion method of the model, if any.
setModel(TableModel) - Method in class org.jdesktop.swingx.JXTreeTable
Overrides superclass version to make sure that the specified TableModel is compatible with JXTreeTable before invoking the inherited version.
setModel(MultiSplitLayout.Node) - Method in class org.jdesktop.swingx.MultiSplitLayout
Set the root of the tree of Split, Leaf, and Divider nodes that define this layout.
setModel(ABNERTrainingModel) - Method in class pt.uminho.anote2.nergate.operations.OperationNERAbner
 
setModel(DoubleBoundedRangeModel) - Method in class pt.uminho.generic.components.JSliderDouble
Sets the doubleBoundedRangeModel.
setModel(TableModel) - Method in class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
setModel(TableModel) - Method in class pt.uminho.generic.genericpanel.tablesearcher.TableSearchPanel
 
setMonthStringBackground(Color) - Method in class org.jdesktop.swingx.JXMonthView
Sets the color used to draw the background of the month string.
setMonthStringForeground(Color) - Method in class org.jdesktop.swingx.JXMonthView
Sets the color used to draw the foreground of the month string.
setMonthStringInsets(Insets) - Method in class org.jdesktop.swingx.JXMonthView
Insets used to modify the width/height when painting the background of the month string area.
setMonthView(JXMonthView) - Method in class org.jdesktop.swingx.JXDatePicker
Set the component to use the specified JXMonthView.
setMorphing(double) - Method in class org.jdesktop.swingx.geom.Morphing2D
Sets the morphing value between the two shapes.
setMultiThumbModel(MultiThumbModel) - Method in class org.jdesktop.swingx.color.GradientPreviewPanel
 
setName(String) - Method in class es.uvigo.ei.sing.BioSearch.datatypes.CollectionResult
 
setName(String) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Sets the name of the action.
setName(String) - Method in class org.jdesktop.swingx.MultiSplitLayout.Leaf
Set the value of the name property.
setName(String) - Method in class org.jdesktop.swingx.MultiSplitLayout.Split
Set the value of the name property.
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.CreateDictionary
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.MergeDictionary
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.AddTermToLexicalWords
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.CreateLexicalWords
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.lexicalwords.MergeLexicalWords
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.AddTermToLookupTable
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.CreateLookupTable
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.MergeLookupTable
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.ontologies.CreateOntology
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.rules.CreateRulesSet
 
setName(String) - Method in class pt.uminho.anote2.aibench.resources.operations.rules.MergeRuleSet
 
setName(String) - Method in class pt.uminho.anote2.datastructures.annotation.ner.SimpleEntity
 
setName(String) - Method in class pt.uminho.anote2.datastructures.annotation.properties.AnnotationColorStyleProperty
 
setName(String) - Method in class pt.uminho.anote2.datastructures.resources.ontology.loaders.OntologicalClass
 
setName(String) - Method in class pt.uminho.anote2.datastructures.resources.ResourcesHelp
 
setName(String) - Method in class pt.uminho.anote2.datastructures.utils.MenuItem
 
setName(String) - Method in enum pt.uminho.anote2.process.IE.io.export.DefaultDelimiterValue
 
setName(String) - Method in enum pt.uminho.anote2.process.IE.io.export.Delimiter
 
setName(String) - Method in enum pt.uminho.anote2.process.IE.io.export.TextDelimiter
 
setNameDic(String) - Method in class pt.uminho.anote2.aibench.resources.datatypes.DictionaryAibench
 
setNameDic(String) - Method in class pt.uminho.anote2.aibench.resources.datatypes.LexicalWordsAibench
 
setNegativilyVerbs(Set<String>) - Method in interface pt.uminho.anote2.process.IE.re.IPolarity
 
setNegativilyVerbs(Set<String>) - Method in class pt.uminho.anote2.relation.datastructures.Polarity
 
setNerProcess(IEProcess) - Method in class pt.uminho.anote2.relation.core.relationModels.RelationModelDefault
 
setNextButtonIcon(ImageIcon) - Method in class pt.uminho.generic.wizard2.Wizard
 
setNextResourceElementID(int) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.DictionaryLoaderHelp
 
setNodeAlone(boolean) - Method in class pt.uminho.anote2.datastructures.process.network.Node
 
setNodeAlone(boolean) - Method in interface pt.uminho.anote2.process.IE.network.INode
 
setNonVisibleStringList(List<String>) - Method in class pt.uminho.generic.components.table.tablelineremover.TableModelLineRemover
 
setNormalization(boolean) - Method in class pt.uminho.anote2.nergate.operations.OperationNERAbner
 
setNormalized(boolean) - Method in interface pt.uminho.anote2.aibench.ner.configuration.INERLexicalResourcesConfiguration
 
setNormalized(boolean) - Method in class pt.uminho.anote2.aibench.ner.configuration.NERLexicalResourcesConfiguration
 
setNotes(String) - Method in interface pt.uminho.anote2.core.report.IReport
 
setNotes(String) - Method in class pt.uminho.anote2.datastructures.report.Report
 
setNParagraphs(int) - Method in class pt.uminho.anote2.aibench.curator.documentstructuring.PieceToSearch
 
setNParagraphs(int) - Method in class pt.uminho.anote2.datastructures.textprocessing.documentStructure.PieceToSearch
 
setNPubs(int) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
setNumberOfThreads(int) - Method in class pt.uminho.anote2.datastructures.utils.multithearding.ThreadProcessManager
 
setObject(E) - Method in class org.jdesktop.swingx.multislider.Thumb
 
setOffset(Point2D) - Method in class org.jdesktop.swingx.painter.effects.AbstractAreaEffect
Setter for property offset.
setOkButton(JButton) - Method in class pt.uminho.anote2.aibench.utils.conf.propertiesmanager.OkCancelMiniPanel
 
setOntologies(Ontologies) - Method in class pt.uminho.anote2.aibench.resources.datatypes.Resources
 
setOntology(OntologyAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.ontologies.LoadOBOOntologyv1p0
 
setOntology(OntologyAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.ontologies.LoadOBOOntologyv1p2
 
setOpacity(float) - Method in class org.jdesktop.swingx.graphics.ReflectionRenderer
Sets the opacity used by the factory to generate reflections.
setOpacity(float) - Method in class org.jdesktop.swingx.graphics.ShadowRenderer
Sets the opacity used by the renderer to generate shadows.
setOpened(boolean) - Method in class pt.uminho.anote2.aibench.curator.datastructures.AiANoteDocument
 
setOpenIcon(Icon) - Method in class org.jdesktop.swingx.JXTree.DelegatingRenderer
 
setOpenIcon(Icon) - Method in class org.jdesktop.swingx.JXTree
Sets the Icon to use for an open folder node.
setOpenIcon(Icon) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the specified icon as the icon to use for rendering open container nodes.
setOrganism(String) - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.PubmedSearchOperation
 
setOrganism(Boolean) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UpdateDictionaryBiowareHouse
 
setOrganism(Properties) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UploadDicionary
 
setOrganism(String) - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedSearch
 
setOrientation(String) - Method in class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
setOrigin(Point2D) - Method in class org.jdesktop.swingx.JXGraph
Sets the origin of the graph.
setOriginalTableModel(TableModel) - Method in class pt.uminho.generic.components.table.tablesearcher.TableModelSearcher
 
setOriginalText(String) - Method in class pt.uminho.anote2.datastructures.annotation.AnnotationPosition
 
setOuterRadius(double) - Method in class org.jdesktop.swingx.geom.Star2D
Sets the outer radius of the star, that is the distance between its center and the tips of the branches.
setOverrulesActionOnClick(boolean) - Method in class org.jdesktop.swingx.JXHyperlink
Sets the overrulesActionOnClick property.
setOverwriteRendererIcons(boolean) - Method in class org.jdesktop.swingx.JXTree
Property to control whether per-tree icons should be copied to the renderer on setCellRenderer.
setOverwriteRendererIcons(boolean) - Method in class org.jdesktop.swingx.JXTreeTable
Property to control whether per-tree icons should be copied to the renderer on setTreeCellRenderer.
setPadding(int) - Method in class org.jdesktop.swingx.border.IconBorder
Sets the padding around the icon.
setPages(String) - Method in class pt.uminho.anote2.datastructures.documents.Publication
 
setPaint(Paint) - Method in class org.jdesktop.swingx.painter.GlossPainter
Changes the paint to be used to fill the gloss.
setPaint(Paint) - Method in class org.jdesktop.swingx.painter.PinstripePainter
Set the paint to use for drawing the pinstripes
setPaintBorderInsets(boolean) - Method in class org.jdesktop.swingx.JXButton
Sets the paintBorderInsets property.
setPaintBorderInsets(boolean) - Method in class org.jdesktop.swingx.JXLabel
Sets the paintBorderInsets property.
setPaintBorderInsets(boolean) - Method in class org.jdesktop.swingx.JXPanel
Sets the paintBorderInsets property.
setPaintCentered(boolean) - Method in class org.jdesktop.swingx.painter.BusyPainter
Centers shape in the area covered by the painter.
setPainter(Painter) - Method in class org.jdesktop.swingx.decorator.PainterHighlighter
Sets the Painter to use in this Highlighter, may be null.
setPainter(Painter) - Method in class org.jdesktop.swingx.painter.PainterGlasspane
 
setPainter(Painter) - Method in class org.jdesktop.swingx.painter.PainterIcon
 
setPainter(Painter) - Method in class org.jdesktop.swingx.renderer.JRendererCheckBox
setPainter(Painter) - Method in class org.jdesktop.swingx.renderer.JRendererLabel
setPainter(Painter) - Method in class org.jdesktop.swingx.renderer.JXRendererHyperlink
setPainter(Painter) - Method in interface org.jdesktop.swingx.renderer.PainterAware
 
setPainter(Painter) - Method in class org.jdesktop.swingx.renderer.WrappingIconPanel
Sets the delegate's Painter if it is of type PainterAware.
setPainters(Painter...) - Method in class org.jdesktop.swingx.painter.CompoundPainter
Sets the array of Painters to use.
setPaintStretched(boolean) - Method in class org.jdesktop.swingx.painter.AbstractAreaPainter
Specifies whether this Painter should attempt to resize the Paint to fit the area being painted.
setPanel(JXLoginPane) - Method in class org.jdesktop.swingx.JXLoginDialog
 
setPanelComponent(Component) - Method in class pt.uminho.generic.wizard2.WizardPanelDescriptor
 
setPanelDescriptorIdentifier(String) - Method in class pt.uminho.generic.wizard2.WizardPanelDescriptor
 
setParagraphAttributes(int, int, AttributeSet, boolean) - Method in class org.jdesktop.swingx.autocomplete.AutoCompleteStyledDocument
setParam(List<Object>) - Method in class pt.uminho.anote2.aibench.utils.wizard.SimpleDialogView
 
setParameters(CSVFileConfigurations) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.LoadDictionaryCSV
 
setParameters(CSVFileConfigurations) - Method in class pt.uminho.anote2.aibench.resources.operations.lookuptables.LoadLookupTableCSV
 
setParent(MultiSplitLayout.Split) - Method in class org.jdesktop.swingx.MultiSplitLayout.Node
Set the value of this Node's parent property.
setParent(MutableTreeTableNode) - Method in class org.jdesktop.swingx.treetable.AbstractMutableTreeTableNode
Sets the parent of this node to newParent.
setParent(MutableTreeTableNode) - Method in interface org.jdesktop.swingx.treetable.MutableTreeTableNode
Sets the parent of this node to newParent.
setParent(InterfaceTreeNode<T>) - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeNodeOntology
 
setParent(InterfaceTreeNode<T>) - Method in interface pt.uminho.anote2.datastructures.utils.tree.InterfaceTreeNode
 
setPassword(char[]) - Method in class org.jdesktop.swingx.JXLoginPane
Sets the Password for this panel.
setPasswordStore(PasswordStore) - Method in class org.jdesktop.swingx.JXLoginPane
Sets the PasswordStore for this panel.
setPattern(String, int) - Method in class org.jdesktop.swingx.decorator.PatternFilter
Convenience to set the pattern in terms of a regex and matchFlags, which are used to compile the pattern to apply.
setPattern(Pattern) - Method in class org.jdesktop.swingx.decorator.PatternFilter
Sets the pattern used by this filter for matching.
setPattern(Pattern) - Method in interface org.jdesktop.swingx.decorator.PatternMatcher
 
setPatternFilter(PatternFilter) - Method in class org.jdesktop.swingx.JXSearchPanel
sets the PatternFilter control.
setPDFFile(File) - Method in interface pt.uminho.anote2.core.document.IPublication
Method to Set PDF File to Document
setPDFFile(File) - Method in class pt.uminho.anote2.datastructures.documents.Publication
 
setPieces(Map<String, String>) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentStructure
 
setPiecesNames(String[]) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentStructure
 
setPixels(BufferedImage, int, int, int, int, int[]) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities
Writes a rectangular area of pixels in the destination BufferedImage.
setPoints(int) - Method in class org.jdesktop.swingx.painter.BusyPainter
Sets total amount of points in spinner.
setPointShape(Shape) - Method in class org.jdesktop.swingx.painter.BusyPainter
Sets new point shape.
setPolarity(int) - Method in interface pt.uminho.anote2.core.annotation.IEventProperties
 
setPolarity(int) - Method in class pt.uminho.anote2.datastructures.annotation.re.EventProperties
 
setPolarity(int) - Method in interface pt.uminho.anote2.process.IE.re.clue.IVerbInfo
0 Negativa 1 Condicional 2 Positiva 3 Unknown
setPolarity(int) - Method in class pt.uminho.anote2.process.IE.re.VerbInfo
 
setPort(String) - Method in class pt.uminho.anote2.datastructures.database.ADatabase
 
setPortion(CapsulePainter.Portion) - Method in class org.jdesktop.swingx.painter.CapsulePainter
Sets the current portion property.
setPosition(float) - Method in class org.jdesktop.swingx.multislider.Thumb
 
setPosition(GlossPainter.GlossPosition) - Method in class org.jdesktop.swingx.painter.GlossPainter
Changes the position of the gloss in the painted area.
setPostagger(IGatePosTagger) - Method in class pt.uminho.anote2.relation.core.relationModels.RelationModelDefault
 
setPreferences(Preferences) - Method in class org.jdesktop.swingx.auth.DefaultUserNameStore
 
setPreferredColumnCount(int) - Method in class org.jdesktop.swingx.JXMonthView
Sets the preferred number of columns of calendars.
setPreferredRowCount(int) - Method in class org.jdesktop.swingx.JXMonthView
Sets the preferred number of rows to paint calendars.Does nothing if rows <= 0.
setPreferredScrollableViewportSize(Dimension) - Method in class org.jdesktop.swingx.JXTable
If the given dimension is null, the auto-calculation of the pref scrollable size is enabled, otherwise the behaviour is the same as super.
setPreferredSize(Dimension) - Method in class org.jdesktop.swingx.JXCollapsiblePane
 
setPreviousData(ANoteDocumentPreviousData) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocument
 
setProcess(IProcess) - Method in class pt.uminho.anote2.datastructures.documents.AnnotatedDocument
 
setProcessName(String) - Method in class pt.uminho.anote2.aibench.curator.operation.OperationManualCuration
 
setProgress(TimeLeftProgress) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
setProgress(TimeLeftProgress) - Method in class pt.uminho.anote2.aibench.resources.datastructures.entrezgene.EntrezGeneExtension
 
setProgress(float) - Method in interface pt.uminho.anote2.aibench.utils.timeleft.ISimpleTimeLeft
 
setProgress(float) - Method in class pt.uminho.anote2.aibench.utils.timeleft.SimpleTimeLeft
 
setProject(Corpora) - Method in class pt.uminho.anote2.aibench.corpus.operations.CreateCorpusOperationByPublicationManager
 
setProject(Corpora) - Method in class pt.uminho.anote2.corpusloaders.operations.CreateCorpusByAIMEDProteinCorpus
 
setProject(Corpora) - Method in class pt.uminho.anote2.corpusloaders.operations.CreateCorpusByAnotev1Corpus
 
setProject(Corpora) - Method in class pt.uminho.anote2.corpusloaders.operations.CreateCorpusByGeniaEventCorpus
 
setProperties(Properties) - Method in class org.jdesktop.swingx.auth.JDBCLoginService
 
setProperties(Properties) - Method in class pt.uminho.anote2.aibench.corpus.operations.CreateCorpusOperationByPublicationManager
 
setProperties(Properties) - Method in class pt.uminho.anote2.carrot.linkage.operations.QueryGerateCarrotClusterOperation
 
setProperties(Properties) - Method in interface pt.uminho.anote2.core.annotation.IEventProperties
 
setProperties(Properties) - Method in class pt.uminho.anote2.datastructures.annotation.re.EventProperties
 
setProperties(Map<String, Object>) - Method in class pt.uminho.anote2.datastructures.utils.conf.propertiesmanager.AbstractPropertyNode
 
setProperties(Map<String, Object>) - Method in interface pt.uminho.anote2.datastructures.utils.conf.propertiesmanager.IPropertyNode
 
setProperties(Properties) - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedSearch
 
setProperties(Properties) - Method in class pt.uminho.anote2.relation.cooccurrence.core.ARECooccurrence
 
setPrototypeValue(Object) - Method in class org.jdesktop.swingx.table.TableColumnExt
Sets the prototypeValue property.
setProxy(IProxy) - Method in class pt.uminho.anote2.aibench.utils.operations.ChangeProxySettingsOperation
 
setProxy(IProxy) - Method in class pt.uminho.anote2.aibench.utils.operations.CreateConfigurationsFile
 
setPublicationManager(PublicationManager) - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.SavePublicationManagerStatus
 
setPublicationManager(Resources) - Method in class pt.uminho.anote2.aibench.resources.operations.SaveResourceStatus
 
setPubManager(PublicationManager) - Method in class pt.uminho.anote2.aibench.publicationmanager.datatypes.QueryInformationRetrievalExtension
 
setPubMedId(String[]) - Method in class es.uvigo.ei.pdfDownloader.PubMedDownloader
 
setPubMedId(String[], PDFDownloadHandler) - Method in class es.uvigo.ei.pdfDownloader.PubMedDownloader
 
setPwd(String) - Method in class pt.uminho.anote2.datastructures.database.ADatabase
 
setQuery(QueryInformationRetrievalExtension) - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.JournalRetrivalListDocs
 
setQuery(QueryInformationRetrievalExtension) - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.UpdateQueryOperation
 
setQuery(QueryInformationRetrievalExtension) - Method in class pt.uminho.anote2.carrot.linkage.operations.CreareQueryFromClusterOperation
 
setQuery(IClustering) - Method in class pt.uminho.anote2.carrot.linkage.operations.CreareQueryFromClusterOperation
 
setQuery(QueryInformationRetrievalExtension) - Method in class pt.uminho.anote2.carrot.linkage.operations.QueryGerateCarrotClusterOperation
 
setRadial(boolean) - Method in class org.jdesktop.swingx.color.GradientPreviewPanel
 
setRangeProperties(double, double, double, double, boolean) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
This method sets all of the sizeModel's data with a single method call.
setRangeProperties(int, int, int, int, boolean) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
setRangeProperties(double, double, double, double, boolean) - Method in interface pt.uminho.generic.components.DoubleBoundedRangeModel
This method sets all of the sizeModel's data with a single method call.
setRawText(String) - Method in class org.jdesktop.swingx.search.PatternModel
 
setReaction_query(String) - Static method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.Biowarehouse.BiowarehouseLoader
 
setReflected(boolean) - Method in class org.jdesktop.swingx.color.GradientPreviewPanel
 
setRegexCreator(PatternModel.RegexCreator) - Method in class org.jdesktop.swingx.search.PatternModel
This is a quick-fix to allow custom strategies for compiling rawtext to patterns.
setRegexCreatorKey(String) - Method in class org.jdesktop.swingx.search.PatternModel
Set the strategy to use for compiling a pattern from rawtext.
setrelevance(RelevanceType) - Method in class pt.uminho.anote2.aibench.publicationmanager.gui.help.RelevanceInfoPane
 
setRelevance(RelevanceType) - Method in class pt.uminho.anote2.aibench.publicationmanager.gui.help.RelevancePanel
 
setRemoveDividers(boolean) - Method in class org.jdesktop.swingx.MultiSplitLayout
If true, the next divider is removed when a component is removed from the layout.
setRenderer(DefaultTreeCellRenderer) - Method in class org.jdesktop.swingx.tree.DefaultXTreeCellEditor
 
setRenderInsideShape(boolean) - Method in class org.jdesktop.swingx.painter.effects.AbstractAreaEffect
Setter for property renderInsideShape.
setRepeated(boolean) - Method in class org.jdesktop.swingx.color.GradientPreviewPanel
 
setReport(IResourceMergeReport) - Method in class pt.uminho.anote2.aibench.resources.gui.MergeReportGUI
 
setReport(IResourceUpdateReport) - Method in class pt.uminho.anote2.aibench.resources.gui.UpdateReportGUI
 
setReport(IResourceUpdateReport) - Method in class pt.uminho.anote2.datastructures.report.resources.PortResourceUpdateReport
 
setREProcess(IRESchema) - Method in class pt.uminho.anote2.aibench.corpus.operations.ExportRESchemaToXGMMLOperation
 
setREProcess(NERSchema) - Method in class pt.uminho.anote2.aibench.corpus.operations.NERExportToCSV
 
setREProcess(File) - Method in class pt.uminho.anote2.aibench.corpus.operations.NERExportToCSV
 
setREProcess(RESchema) - Method in class pt.uminho.anote2.aibench.corpus.operations.REExportToCSV
 
setREProcess(File) - Method in class pt.uminho.anote2.aibench.corpus.operations.REExportToCSV
 
setResizable(boolean) - Method in class pt.uminho.generic.wizard2.Wizard
 
setResizeHandleEnabled(boolean) - Method in class org.jdesktop.swingx.JXStatusBar
 
setResource(IDictionary) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.DictionaryLoaderHelp
 
setResourceElementID(int) - Method in interface pt.uminho.anote2.core.annotation.IEntityAnnotation
 
setResourceElementID(int) - Method in class pt.uminho.anote2.datastructures.annotation.ner.EntityAnnotation
 
setResourceIdsOptions(Map<Integer, String>) - Method in class pt.uminho.anote2.aibench.ner.datastructures.ElementToNer
 
setResources(Resources) - Method in class pt.uminho.anote2.aibench.resources.datatypes.Dictionaries
 
setResources(Resources) - Method in class pt.uminho.anote2.aibench.resources.datatypes.LexicalWordsSet
 
setResources(Resources) - Method in class pt.uminho.anote2.aibench.resources.datatypes.LookupTables
 
setResourceSource2(IResource<IResourceElement>) - Method in interface pt.uminho.anote2.core.report.resources.IResourceMergeReport
 
setResourceSource2(IResource<IResourceElement>) - Method in class pt.uminho.anote2.datastructures.report.resources.ResourceMergeReport
 
setResourcey(DictionaryAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.RemoveClassElementsOperation
 
setResultAttributes(Vector<String>) - Method in class es.uvigo.ei.sing.BioSearch.datatypes.CollectionResult
 
setReturnVal(int) - Method in class pt.uminho.generic.genericpanel.filechooser.FileChooserAibench
 
setReversed(boolean) - Method in class org.jdesktop.swingx.color.GradientPreviewPanel
 
setRightDecoration(JComponent) - Method in class org.jdesktop.swingx.JXTitledPanel
Adds the given JComponent as a decoration on the right of the title
setRightDecoration(JComponent) - Method in class org.jdesktop.swingx.plaf.basic.BasicTitledPanelUI
Adds the given JComponent as a decoration on the right of the title
setRightDecoration(JComponent) - Method in class org.jdesktop.swingx.plaf.TitledPanelUI
Adds the given JComponent as a decoration on the right of the title
setRolloverEnabled(boolean) - Method in class org.jdesktop.swingx.JXList
Property to enable/disable rollover support.
setRolloverEnabled(boolean) - Method in class org.jdesktop.swingx.JXTable
Property to enable/disable rollover support.
setRolloverEnabled(boolean) - Method in class org.jdesktop.swingx.JXTree
Sets a boolean to enable/disable rollover support.
setRoot(TreeTableNode) - Method in class org.jdesktop.swingx.treetable.DefaultTreeTableModel
Sets the root for this table model.
setRoot(File) - Method in class org.jdesktop.swingx.treetable.FileSystemModel
Sets the root for this tree table model.
setRootNode(InterfaceTreeNode<T>) - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeOntology
 
setRootNode(T) - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeOntology
 
setRootPane(JRootPane) - Method in class org.jdesktop.swingx.JXFrame
Overloaded to make this public.
setRootVisible(boolean) - Method in class org.jdesktop.swingx.JXTreeTable
Determines whether or not the root node from the TreeModel is visible.
setRounded(boolean) - Method in class org.jdesktop.swingx.painter.RectanglePainter
sets if the rectangle should be rounded
setRoundHeight(int) - Method in class org.jdesktop.swingx.painter.RectanglePainter
sets the round height of the rectangle
setRoundWidth(int) - Method in class org.jdesktop.swingx.painter.RectanglePainter
sets the round width of the rectangle
setRowHeight(int) - Method in class org.jdesktop.swingx.JXTable
Overriden to keep view/model coordinates of SizeSequence in synch.
setRowHeight(int, int) - Method in class org.jdesktop.swingx.JXTable
Does nothing if support of individual rowHeights is not enabled.
setRowHeight(int, int) - Method in class org.jdesktop.swingx.JXTreeTable
Throws UnsupportedOperationException because variable height rows are not supported.
setRowHeight(int) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the row height for this JXTreeTable and forwards the row height to the renderering tree.
setRowHeightEnabled(boolean) - Method in class org.jdesktop.swingx.JXTable
Sets enablement of individual rowHeight support.
setRowLayout(boolean) - Method in class org.jdesktop.swingx.MultiSplitLayout.Split
Set the rowLayout property.
setRule(String) - Method in class pt.uminho.anote2.aibench.resources.operations.rules.NewRule
 
setRuleClass(String) - Method in class pt.uminho.anote2.aibench.resources.operations.rules.NewRule
 
setRules(List<IResourceElement>) - Method in class pt.uminho.anote2.aibench.ner.datastructures.ElementToNer
 
setRules(HandRules) - Method in class pt.uminho.anote2.ner.ner.NER
 
setRulesDest(RulesAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.rules.MergeRuleSet
 
setRulesSource(RulesAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.rules.MergeRuleSet
 
setSaturation(Color, float) - Static method in class org.jdesktop.swingx.color.ColorUtil
Returns a new color equal to the old one, except the saturation is set to the new value.
setSaveMode(JXLoginPane.SaveMode) - Method in class org.jdesktop.swingx.JXLoginPane
The save mode indicates whether the "save" password is checked by default.
setScale(double) - Method in class org.jdesktop.swingx.JXImageView
Sets the current image scale .
setScaleToFit(boolean) - Method in class org.jdesktop.swingx.painter.ImagePainter
 
setScaleType(ImagePainter.ScaleType) - Method in class org.jdesktop.swingx.painter.ImagePainter
 
setSchema(String) - Method in class pt.uminho.anote2.datastructures.database.ADatabase
 
setScrollableTracksViewportHeight(boolean) - Method in class org.jdesktop.swingx.JXPanel
 
setScrollableTracksViewportWidth(boolean) - Method in class org.jdesktop.swingx.JXPanel
 
setScrollOnExpand(boolean) - Method in class org.jdesktop.swingx.JXTaskPane
Should this group be scrolled to be visible on expand.
setScrollsOnExpand(boolean) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the value of the scrollsOnExpand property for the tree part.
setSearchable(Searchable) - Method in class org.jdesktop.swingx.JXEditorPane
sets the Searchable for this editor.
setSearchable(Searchable) - Method in class org.jdesktop.swingx.JXFindBar
 
setSearchable(Searchable) - Method in class org.jdesktop.swingx.JXFindPanel
Sets the Searchable targeted of this find widget.
setSearchable(Searchable) - Method in class org.jdesktop.swingx.JXList
sets the Searchable for this editor.
setSearchable(Searchable) - Method in class org.jdesktop.swingx.JXTable
sets the Searchable for this editor.
setSearchable(Searchable) - Method in class org.jdesktop.swingx.JXTree
Sets the Searchable for this component.
setSearchable_indexes(int[]) - Method in class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
setSearchParams(String) - Method in class es.uvigo.ei.sing.BioSearch.datatypes.CollectionResult
 
setSelected(boolean) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Changes the state of the action
setSelected(Object, boolean) - Method in class org.jdesktop.swingx.action.ActionManager
Sets the selected state of a toggle action.
setSelected(boolean) - Method in class org.jdesktop.swingx.table.ColumnControlButton.ColumnVisibilityAction
 
setSelected(Delimiter) - Method in class pt.uminho.anote2.datastructures.utils.delimiter.DelimiterSelectionPanel
 
setSelectedBackground(Color) - Method in class org.jdesktop.swingx.decorator.ColorHighlighter
Sets the selected background color of this ColorHighlighter and notifies registered ChangeListeners.
setSelectedForeground(Color) - Method in class org.jdesktop.swingx.decorator.ColorHighlighter
Sets the selected foreground color of this ColorHighlighter and notifies registered ChangeListeners.
setSelectedItem(Object) - Method in class org.jdesktop.swingx.autocomplete.AbstractAutoCompleteAdaptor
Sets the selected item.
setSelectedItem(Object) - Method in class org.jdesktop.swingx.autocomplete.ComboBoxAdaptor
 
setSelectedItem(Object) - Method in class org.jdesktop.swingx.autocomplete.ListAdaptor
 
setSelectedItem(Object) - Method in class org.jdesktop.swingx.autocomplete.TextComponentAdaptor
 
setSelectedItem(Object) - Method in class org.jdesktop.swingx.combobox.EnumComboBoxModel
Set the selected item.
setSelectedItem(Object) - Method in class org.jdesktop.swingx.combobox.ListComboBoxModel
Set the selected item.
setSelectedItemAsString(String) - Method in class org.jdesktop.swingx.autocomplete.AbstractAutoCompleteAdaptor
Sets the string representation in use for the currently selected item.
setSelectedText(String) - Method in class pt.uminho.anote2.aibench.curator.view.ANoteDocumentView
 
setSelectedText(String) - Method in class pt.uminho.anote2.aibench.curator.view.REANoteDocumentView
 
setSelectedValue(T) - Method in class org.jdesktop.swingx.JXRadioGroup
 
setSelectingPublications(Set<Integer>) - Method in class pt.uminho.anote2.aibench.publicationmanager.datatypes.QueryInformationRetrievalExtension
 
setSelectionBackground(Color) - Method in class org.jdesktop.swingx.JXMonthView
Sets the selected background color to c.
setSelectionBackground(Color) - Method in class org.jdesktop.swingx.JXTable
Overridden because super throws NPE on null param.
setSelectionBackground(Color) - Method in class org.jdesktop.swingx.JXTree
Sets the background color for selected cells.
setSelectionBackground(Color) - Method in class org.jdesktop.swingx.JXTreeTable
Overridden because super throws NPE on null param.
setSelectionDate(Date) - Method in class org.jdesktop.swingx.JXMonthView
Sets the model's selection to the given date or clears the selection if null.
setSelectionForeground(Color) - Method in class org.jdesktop.swingx.JXMonthView
Sets the selected foreground color to c.
setSelectionForeground(Color) - Method in class org.jdesktop.swingx.JXTable
Overridden because super throws NPE on null param.
setSelectionForeground(Color) - Method in class org.jdesktop.swingx.JXTree
Sets the foreground color for selected cells.
setSelectionForeground(Color) - Method in class org.jdesktop.swingx.JXTreeTable
Overridden because super throws NPE on null param.
setSelectionInterval(Date, Date) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Sest the specified selection interval to the selection model.
setSelectionInterval(Date, Date) - Method in class org.jdesktop.swingx.calendar.DaySelectionModel
Sest the specified selection interval to the selection model.
setSelectionInterval(Date, Date) - Method in class org.jdesktop.swingx.calendar.DefaultDateSelectionModel
Sest the specified selection interval to the selection model.
setSelectionInterval(Date, Date) - Method in class org.jdesktop.swingx.calendar.SingleDaySelectionModel
Sest the specified selection interval to the selection model.
setSelectionInterval(Date, Date) - Method in class org.jdesktop.swingx.JXMonthView
Sets the selection interval to the selection model.
setSelectionMode(DateSelectionModel.SelectionMode) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Set the selection mode.
setSelectionMode(DateSelectionModel.SelectionMode) - Method in class org.jdesktop.swingx.calendar.DaySelectionModel
 
setSelectionMode(DateSelectionModel.SelectionMode) - Method in class org.jdesktop.swingx.calendar.DefaultDateSelectionModel
Set the selection mode.
setSelectionMode(DateSelectionModel.SelectionMode) - Method in class org.jdesktop.swingx.calendar.SingleDaySelectionModel
Set the selection mode.
setSelectionMode(DateSelectionModel.SelectionMode) - Method in class org.jdesktop.swingx.JXMonthView
Set the selection mode for this JXMonthView.
setSelectionMode(int) - Method in class org.jdesktop.swingx.JXTreeTable
Overridden to ensure that private renderer state is kept in sync with the state of the component.
setSelectionMode(int) - Method in class pt.uminho.generic.genericpanel.tablesearcher.SearchableJTable
 
setSelectionModel(ListSelectionModel) - Method in class org.jdesktop.swingx.JXList
Overridden to update selectionMapper
setSelectionModel(DateSelectionModel) - Method in class org.jdesktop.swingx.JXMonthView
Sets the date selection model to drive this monthView.
setSelectionModel(ListSelectionModel) - Method in class org.jdesktop.swingx.JXTable
Overridden to update selectionMapper
setSentences(List<ISentence>) - Method in class pt.uminho.anote2.datastructures.documents.AnnotatedDocument
 
setServer(String) - Method in class org.jdesktop.swingx.auth.LoginService
 
setServers(List<String>) - Method in class org.jdesktop.swingx.JXLoginPane
Sets the list of servers.
setShadowColor(Color) - Method in class org.jdesktop.swingx.border.DropShadowBorder
 
setShadowOpacity(float) - Method in class org.jdesktop.swingx.border.DropShadowBorder
 
setShadowSize(int) - Method in class org.jdesktop.swingx.border.DropShadowBorder
 
setShape(Shape) - Method in class org.jdesktop.swingx.painter.ShapePainter
Sets the shape to fillPaint.
setShapeMasked(boolean) - Method in class org.jdesktop.swingx.painter.effects.AbstractAreaEffect
Setter for property shapeMasked.
setShortDescription(String) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Sets the short description of the action.
setShouldFillShape(boolean) - Method in class org.jdesktop.swingx.painter.effects.AbstractAreaEffect
Setter for property shouldFillShape.
setShowBottomShadow(boolean) - Method in class org.jdesktop.swingx.border.DropShadowBorder
 
setShowGrid(boolean, boolean) - Method in class org.jdesktop.swingx.JXTable
Convenience to set both grid line visibility and default margin for horizontal/vertical lines.
setShowGrid(boolean) - Method in class org.jdesktop.swingx.JXTable
Behaves exactly like super.
setShowingLeadingDays(boolean) - Method in class org.jdesktop.swingx.JXMonthView
Sets a boolean property indicating whether or not to show leading dates for a months displayed by this component.
setShowingOnStartup(boolean) - Method in interface org.jdesktop.swingx.JXTipOfTheDay.ShowOnStartupChoice
Persists the user choice
setShowingTrailingDays(boolean) - Method in class org.jdesktop.swingx.JXMonthView
Sets a boolean property indicating whether or not to show trailing dates for the months displayed by this component.
setShowingWeekNumber(boolean) - Method in class org.jdesktop.swingx.JXMonthView
Set whether or not this JXMonthView will display week numbers or not.
setShowLeftShadow(boolean) - Method in class org.jdesktop.swingx.border.DropShadowBorder
 
setShowRightShadow(boolean) - Method in class org.jdesktop.swingx.border.DropShadowBorder
 
setShowsRootHandles(boolean) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the value of the showsRootHandles property for the tree part.
setShowTopShadow(boolean) - Method in class org.jdesktop.swingx.border.DropShadowBorder
 
setSize(int) - Method in class org.jdesktop.swingx.graphics.ShadowRenderer
Sets the size, in pixels, used by the renderer to generate shadows.
setSmallIcon(Icon) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Sets the small icon which represents the action.
setSortable(boolean) - Method in class org.jdesktop.swingx.JXTable
Sets "sortable" property indicating whether or not this table supports sortable columns.
setSortable(boolean) - Method in class org.jdesktop.swingx.JXTreeTable
overridden to do nothing.
setSortable(boolean) - Method in class org.jdesktop.swingx.table.TableColumnExt
Sets the sortable property.
setSortGestureRecognizer(JXTableHeader.SortGestureRecognizer) - Method in class org.jdesktop.swingx.JXTableHeader
Set the SortGestureRecognizer for use in the HeaderListener.
setSortKey(SortKey) - Method in class org.jdesktop.swingx.decorator.Sorter
Updates itself according to the SortKey's properties.
setSortKeys(List<? extends SortKey>) - Method in interface org.jdesktop.swingx.decorator.SortController
Set the sort order by column.
setSortOrder(SortOrder) - Method in class org.jdesktop.swingx.JXList
Sorts the list using SortOrder.
setSortOrder(int, SortOrder) - Method in class org.jdesktop.swingx.JXTable
Sorts the table by the given column using SortOrder.
setSortOrder(Object, SortOrder) - Method in class org.jdesktop.swingx.JXTable
Sorts the table by the given column using the SortOrder.
setSource(DictionaryAibench) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UpdateDictionaryBiowareHouse
 
setSource(String) - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UploadDicionary
 
setSource(IDatabase) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.Biowarehouse.Loader
 
setSourceID(int) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.Biowarehouse.BiowarehouseLoader
 
setSourceID(int) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.DictionaryLoaderHelp
 
setSourcesLinkage(Set<Integer>) - Method in class pt.uminho.anote2.datastructures.utils.MenuItem
 
setSourceURL(String) - Method in interface pt.uminho.anote2.core.document.IDocument
Method that change url Document
setSourceURL(String) - Method in class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
setSpacing(double) - Method in class org.jdesktop.swingx.painter.PinstripePainter
Sets the spacing between pinstripes
setSpecial(boolean) - Method in class org.jdesktop.swingx.JXTaskPane
Sets this pane to be "special" or not.
setSquareSize(double) - Method in class org.jdesktop.swingx.painter.CheckerboardPainter
Specifies the squareSize of the squares.
setStart(int) - Method in class pt.uminho.anote2.datastructures.annotation.AnnotationPosition
 
setStartOffset(long) - Method in class pt.uminho.anote2.datastructures.annotation.Annotation
 
setStartPosition(JXFrame.StartPosition) - Method in class org.jdesktop.swingx.JXFrame
 
setStarttime(long) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
setStateAction() - Method in class org.jdesktop.swingx.action.AbstractActionExt
Set the state property to true.
setStateAction(boolean) - Method in class org.jdesktop.swingx.action.AbstractActionExt
Set the state property.
setStateAction(boolean) - Method in class org.jdesktop.swingx.hyperlink.AbstractHyperlinkAction
Set the state property.
setStatus(String) - Method in class pt.uminho.anote2.datastructures.documents.Publication
 
setStatusBar(JXStatusBar) - Method in class org.jdesktop.swingx.JXFrame
 
setStatusBar(JXStatusBar) - Method in class org.jdesktop.swingx.JXRootPane
Set the status bar for this root pane.
setSteps(List<String>) - Method in interface pt.uminho.anote2.aibench.utils.timeleft.ITimeLeftProgressSteps
 
setSteps(List<String>) - Method in class pt.uminho.anote2.aibench.utils.timeleft.TimeLeftProgressSteps
 
setStringValue(StringValue) - Method in class org.jdesktop.swingx.renderer.ComponentProvider
Sets the StringValue to use.
setStripeWidth(double) - Method in class org.jdesktop.swingx.painter.PinstripePainter
Set the width of the pinstripes
setStyle(JXImagePanel.Style) - Method in class org.jdesktop.swingx.JXImagePanel
Sets what style to use when painting the image
setStyle(AbstractAreaPainter.Style) - Method in class org.jdesktop.swingx.painter.AbstractAreaPainter
The shape can be filled or simply stroked (outlined), or both or none.
setStyle(String) - Method in class pt.uminho.anote2.datastructures.annotation.properties.AnnotationColorStyleProperty
 
setSubDelimiter(Delimiter) - Method in class pt.uminho.anote2.datastructures.utils.generic.ColumnParameters
 
setSubitems(List<MenuItem>) - Method in class pt.uminho.anote2.datastructures.utils.MenuItem
 
setSynchronous(boolean) - Method in class org.jdesktop.swingx.auth.LoginService
Sets the synchronous property
setSynonyms(List<String>) - Method in class pt.uminho.anote2.datastructures.resources.ontology.loaders.OntologicalClass
 
setTable(JTable) - Method in class org.jdesktop.swingx.JXTableHeader
Sets the associated JTable.
setTableRenderer(JTable, Integer) - Static method in class pt.uminho.anote2.aibench.resources.gui.guiUtils
This method changes the default renderer of a given table
setTableRenderer(JTable, int[], Color[], Integer) - Static method in class pt.uminho.anote2.aibench.resources.gui.guiUtils
This method changes the default renderer of a given table
setTableRenderer(JTable, Integer) - Static method in class pt.uminho.anote2.aibench.utils.gui.guiUtils
This method changes the default renderer of a given table
setTableRenderer(JTable, int[], Color[], Integer) - Static method in class pt.uminho.anote2.aibench.utils.gui.guiUtils
This method changes the default renderer of a given table
setTableSelectionMode(int) - Method in class pt.uminho.generic.genericpanel.tablesearcher.TableSearchPanel
 
setTarget(Targetable) - Method in class org.jdesktop.swingx.action.TargetManager
Gets the current targetable component.
setTarget(T) - Method in class org.jdesktop.swingx.hyperlink.AbstractHyperlinkAction
PRE: isTargetable(target)
setTarget(String) - Method in class org.jdesktop.swingx.hyperlink.LinkModel
Set the target that the URL should load into.
setTargetClass(Class) - Method in class org.jdesktop.swingx.renderer.HyperlinkProvider
Sets the class the action is supposed to handle.
setTargetManager(TargetManager) - Method in class org.jdesktop.swingx.action.TargetableAction
Set target manager which will handle this command.
setTerm(String) - Method in class pt.uminho.anote2.aibench.corpus.utils.ANoteAnnotation
 
setTerm(String) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteAnnotation
 
setTermClass(String) - Method in class pt.uminho.anote2.aibench.corpus.utils.ANoteAnnotation
 
setTermClass(OrderedMap<String, String>) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentAnnotations
 
setTerminateEditOnFocusLost(boolean) - Method in class org.jdesktop.swingx.JXTable
Sets the property to determine whether an ongoing edit should be terminated if the focus is moved to somewhere outside of the table.
setTermsMergeAdding(int) - Method in class pt.uminho.anote2.aibench.resources.datatypes.LexicalWordsAibench
 
setText(String) - Method in class org.jdesktop.swingx.hyperlink.LinkModel
Set the display text.
setText(String) - Method in class org.jdesktop.swingx.JXButton
 
setText(String) - Method in class org.jdesktop.swingx.painter.TextPainter
Sets the text to draw
setText(String) - Method in class pt.uminho.anote2.aibench.curator.documentstructuring.PieceToSearch
 
setText(String) - Method in class pt.uminho.anote2.datastructures.textprocessing.documentStructure.PieceToSearch
 
setTextAlignment(JXLabel.TextAlignment) - Method in class org.jdesktop.swingx.JXLabel
Sets style of wrapping the text.
setTextDelimiter(TextDelimiter) - Method in class pt.uminho.anote2.datastructures.utils.generic.CSVFileConfigurations
 
setTextPainted(boolean) - Method in class org.jdesktop.swingx.JXGraph
Enables or disables the painting of axis labels depending on the value of the parameter.
setTextRotation(double) - Method in class org.jdesktop.swingx.JXLabel
Sets new value for text rotation.
setThumbRenderer(ThumbRenderer) - Method in class org.jdesktop.swingx.JXMultiThumbSlider
 
setTime(long, int, int) - Method in interface pt.uminho.anote2.aibench.utils.timeleft.ISimpleTimeLeft
 
setTime(long, int, int) - Method in interface pt.uminho.anote2.aibench.utils.timeleft.ITimeLeftProgress
 
setTime(long, int, int) - Method in class pt.uminho.anote2.aibench.utils.timeleft.SimpleTimeLeft
 
setTime(long, int, int) - Method in class pt.uminho.anote2.aibench.utils.timeleft.TimeLeftProgress
 
setTime(long, int, int) - Method in class pt.uminho.anote2.aibench.utils.timeleft.TimeLeftProgressSteps
 
setTime(Long) - Method in interface pt.uminho.anote2.core.report.IReport
 
setTime(Long) - Method in class pt.uminho.anote2.datastructures.report.Report
 
setTime(float) - Method in class pt.uminho.anote2.workflow.gui.help.ReportGeneralPanel
 
setTimeString(String) - Method in interface pt.uminho.anote2.aibench.utils.timeleft.ITimeLeftProgress
 
setTimeString(String) - Method in class pt.uminho.anote2.aibench.utils.timeleft.TimeLeftProgress
 
setTimeZone(TimeZone) - Method in class org.jdesktop.swingx.calendar.AbstractDateSelectionModel
Sets the TimeZone of this model.
setTimeZone(TimeZone) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Sets the TimeZone of this model.
setTimeZone(TimeZone) - Method in class org.jdesktop.swingx.JXDatePicker
Sets the time zone with the given time zone value.
setTimeZone(TimeZone) - Method in class org.jdesktop.swingx.JXMonthView
Sets the time zone with the given time zone value.
setTip(Object) - Method in class org.jdesktop.swingx.tips.DefaultTip
 
setTipName(String) - Method in class org.jdesktop.swingx.tips.DefaultTip
 
setTips(TipOfTheDayModel.Tip[]) - Method in class org.jdesktop.swingx.tips.DefaultTipOfTheDayModel
 
setTitle(String) - Method in class org.jdesktop.swingx.JXHeader
Sets the title to use.
setTitle(String) - Method in class org.jdesktop.swingx.JXTaskPane
Sets the title to be displayed in the border of this pane.
setTitle(String) - Method in class org.jdesktop.swingx.JXTitledPanel
 
setTitle(String) - Method in class org.jdesktop.swingx.JXTitledSeparator
Sets the title for the separator.
setTitle(String) - Method in class org.jdesktop.swingx.table.TableColumnExt
Sets the title of this view column.
setTitle(String) - Method in class pt.uminho.anote2.aibench.corpus.utils.ANoteAnnotation
 
setTitle(String) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteAnnotation
 
setTitle(String) - Method in class pt.uminho.anote2.aibench.utils.gui.DialogGenericViewOkButtonOnly
 
setTitle(String) - Method in class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
setTitle(String) - Method in class pt.uminho.generic.components.gradientpanel.topgradientpanel.TextInformationPanel
 
setTitle(String) - Method in class pt.uminho.generic.wizard2.Wizard
 
setTitleColor(Color) - Method in class pt.uminho.generic.components.gradientpanel.topgradientpanel.TextInformationPanel
 
setTitleFont(Font) - Method in class org.jdesktop.swingx.JXHeader
Sets new font for title.
setTitleFont(Font) - Method in class org.jdesktop.swingx.JXTitledPanel
 
setTitleFont(Font) - Method in class pt.uminho.generic.components.gradientpanel.topgradientpanel.TextInformationPanel
 
setTitleForeground(Color) - Method in class org.jdesktop.swingx.JXHeader
Sets title foreground color.
setTitleForeground(Color) - Method in class org.jdesktop.swingx.JXTitledPanel
 
setTitlePainter(Painter) - Method in class org.jdesktop.swingx.JXTitledPanel
Set the Painter to use for painting the title section of the JXTitledPanel.
setTo_date(Properties) - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.PubmedSearchOperation
 
setTodayBackground(Color) - Method in class org.jdesktop.swingx.JXMonthView
Sets the color used to draw the bounding box around today.
setToggleClickCount(int) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the number of mouse clicks before a node will expand or close.
setToolBar(JToolBar) - Method in class org.jdesktop.swingx.JXFrame
 
setToolBar(JToolBar) - Method in class org.jdesktop.swingx.JXRootPane
Set the toolbar bar for this root pane.
setToolTipText(String) - Method in class org.jdesktop.swingx.renderer.JRendererCheckBox
Overridden to not automatically de/register itself from/to the ToolTipManager.
setToolTipText(String) - Method in class org.jdesktop.swingx.renderer.JRendererLabel
Overridden to not automatically de/register itself from/to the ToolTipManager.
setToolTipText(String) - Method in class org.jdesktop.swingx.renderer.JXRendererHyperlink
Overridden to not automatically de/register itself from/to the ToolTipManager.
setToolTipText(String) - Method in class org.jdesktop.swingx.table.TableColumnExt
Registers the text to display in the column's tool tip.
setTrackingLookAndFeelChanges(boolean) - Static method in class org.jdesktop.swingx.plaf.LookAndFeelAddons
If true, everytime the Swing look and feel is changed, the addon which best matches the current look and feel will be automatically selected.
setTrackRenderer(TrackRenderer) - Method in class org.jdesktop.swingx.JXMultiThumbSlider
 
setTrailLength(int) - Method in class org.jdesktop.swingx.painter.BusyPainter
Sets length of the trail in points.
setTrajectory(Shape) - Method in class org.jdesktop.swingx.painter.BusyPainter
Sets new trajectory.
setTransform(AffineTransform) - Method in class org.jdesktop.swingx.painter.CompoundPainter
Set a transform to be applied to all painters contained in this CompoundPainter
setTraversable(boolean) - Method in class org.jdesktop.swingx.JXMonthView
Set whether or not the month view will display buttons to allow the user to traverse to previous or next months.
setTreeCellRenderer(TreeCellRenderer) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the specified TreeCellRenderer as the Tree cell renderer.
setTreeTableModel(TreeTableModel) - Method in class org.jdesktop.swingx.JXTreeTable
Sets the data model for this JXTreeTable to the specified TreeTableModel.
setType(String) - Method in class pt.uminho.anote2.datastructures.annotation.Annotation
 
setUI(DatePickerUI) - Method in class org.jdesktop.swingx.JXDatePicker
Sets the L&F object that renders this component.
setUI(ErrorPaneUI) - Method in class org.jdesktop.swingx.JXErrorPane
Sets the look and feel (L&F) object that renders this component.
setUI(HeaderUI) - Method in class org.jdesktop.swingx.JXHeader
Sets the look and feel (L&F) object that renders this component.
setUI(LoginPaneUI) - Method in class org.jdesktop.swingx.JXLoginPane
Sets the look and feel (L&F) object that renders this component.
setUI(MonthViewUI) - Method in class org.jdesktop.swingx.JXMonthView
Sets the L&F object that renders this component.
setUI(MultiThumbSliderUI) - Method in class org.jdesktop.swingx.JXMultiThumbSlider
 
setUI(StatusBarUI) - Method in class org.jdesktop.swingx.JXStatusBar
Sets the look and feel (L&F) object that renders this component.
setUI(TaskPaneUI) - Method in class org.jdesktop.swingx.JXTaskPane
Sets the L&F object that renders this component.
setUI(TaskPaneContainerUI) - Method in class org.jdesktop.swingx.JXTaskPaneContainer
Sets the L&F object that renders this component.
setUI(TipOfTheDayUI) - Method in class org.jdesktop.swingx.JXTipOfTheDay
Sets the L&F object that renders this component.
setUI(TitledPanelUI) - Method in class org.jdesktop.swingx.JXTitledPanel
Sets the look and feel (L&F) object that renders this component.
setUnclickedColor(Color) - Method in class org.jdesktop.swingx.JXHyperlink
Sets the color for the previously visited link.
setUnselectableDates(SortedSet<Date>) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Sets a collection of dates which are not selectable.
setUnselectableDates(SortedSet<Date>) - Method in class org.jdesktop.swingx.calendar.DaySelectionModel
Sets a collection of dates which are not selectable.
setUnselectableDates(SortedSet<Date>) - Method in class org.jdesktop.swingx.calendar.DefaultDateSelectionModel
Sets a collection of dates which are not selectable.
setUnselectableDates(SortedSet<Date>) - Method in class org.jdesktop.swingx.calendar.SingleDaySelectionModel
Sets a collection of dates which are not selectable.
setUnselectableDates(Date...) - Method in class org.jdesktop.swingx.JXMonthView
Sets the dates that should be unselectable.
setUnwrapUserObject(boolean) - Method in class org.jdesktop.swingx.renderer.WrappingProvider
Sets the unwrapUserObject property.
setUpIcon(Icon) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setUpperBound(Date) - Method in class org.jdesktop.swingx.calendar.AbstractDateSelectionModel
Set the upper bound date that is allowed to be selected for this model.
setUpperBound(Date) - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel
Set the upper bound date that is allowed to be selected for this model.
setUpperBound(Date) - Method in class org.jdesktop.swingx.JXMonthView
Set the upper bound date that is allowed to be selected.
setUrl(URL) - Method in class org.jdesktop.swingx.action.OpenBrowserAction
 
setURL(String) - Method in class org.jdesktop.swingx.action.ServerAction
Set the url for the action.
setUrl(String) - Method in class org.jdesktop.swingx.auth.JDBCLoginService
 
setURL(URL) - Method in class org.jdesktop.swingx.hyperlink.LinkModel
Set the url and resets the visited flag.
setUrl(String) - Method in class pt.uminho.anote2.aibench.curator.operation.OpenBrowser
 
setUrl(String) - Method in class pt.uminho.anote2.datastructures.documents.Publication
 
setUrl(String) - Method in class pt.uminho.anote2.datastructures.utils.MenuItem
 
setURLString(String) - Method in class org.jdesktop.swingx.hyperlink.LinkModel
 
setUseFindBar(boolean) - Method in class org.jdesktop.swingx.search.SearchFactory
Sets the default search type to incremental or batch, for a true/false boolean.
setUser(String) - Method in class pt.uminho.anote2.datastructures.database.ADatabase
 
setUserDelimiter(String) - Method in enum pt.uminho.anote2.process.IE.io.export.DefaultDelimiterValue
 
setUserDelimiter(String) - Method in enum pt.uminho.anote2.process.IE.io.export.Delimiter
 
setUserDelimiter(String) - Method in enum pt.uminho.anote2.process.IE.io.export.TextDelimiter
 
setUserMinSize(int) - Method in class org.jdesktop.swingx.MultiSplitLayout
Set the user defined minimum size support in the USER_MIN_SIZE_LAYOUT layout mode.
setUserName(String) - Method in class org.jdesktop.swingx.JXLoginPane.ComboNamePanel
 
setUserName(String) - Method in interface org.jdesktop.swingx.JXLoginPane.NameComponent
 
setUserName(String) - Method in class org.jdesktop.swingx.JXLoginPane
Sets the User name for this panel.
setUserName(String) - Method in class org.jdesktop.swingx.JXLoginPane.SimpleNamePanel
 
setUserNameEnabled(boolean) - Method in class org.jdesktop.swingx.JXLoginPane
Enables or disables User name for this panel.
setUserNames(String[]) - Method in class org.jdesktop.swingx.auth.DefaultUserNameStore
setUserNames(String[]) - Method in class org.jdesktop.swingx.auth.UserNameStore
 
setUserNames(String[]) - Method in class org.jdesktop.swingx.JXLoginPane.ComboNamePanel
 
setUserNameStore(UserNameStore) - Method in class org.jdesktop.swingx.JXLoginPane
Sets the user name store for this panel.
setUserObject(Object) - Method in class org.jdesktop.swingx.treetable.AbstractMutableTreeTableNode
Sets the user object stored in this node.
setUserObject(TreeTableNode, Object) - Method in class org.jdesktop.swingx.treetable.DefaultTreeTableModel
Sets the user object for a node.
setUserObject(Object) - Method in interface org.jdesktop.swingx.treetable.TreeTableNode
Sets the user object stored in this node.
setUsingKeyboard(boolean) - Method in class org.jdesktop.swingx.plaf.basic.BasicMonthViewUI
 
setUsingTitleInAbstract(boolean) - Static method in class pt.uminho.anote2.datastructures.utils.conf.OtherConfigurations
 
setValidColumnIndex(Set<Integer>) - Method in class pt.uminho.generic.components.table.tablesearcher.TableModelSearcher
 
setValidColumnIndex(Set<Integer>) - Method in class pt.uminho.generic.genericpanel.tablesearcher.TableSearchPanel
 
setValidColumnIndexSet(Set<Integer>) - Method in class pt.uminho.generic.components.table.tablelineremover.TableModelLineRemover
 
setValue(T) - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeNodeOntology
 
setValue(T) - Method in interface pt.uminho.anote2.datastructures.utils.tree.InterfaceTreeNode
 
setValue(double) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
Sets the sizeModel's current value to newValue if newValue satisfies the sizeModel's constraints.
setValue(int) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
setValue(double) - Method in interface pt.uminho.generic.components.DoubleBoundedRangeModel
Sets the sizeModel's current value to newValue if newValue satisfies the sizeModel's constraints.
setValueAt(Object, int, int) - Method in class org.jdesktop.swingx.decorator.ComponentAdapter
Sets the value of the target component's cell identified by the specified row and column in model coordinates.
setValueAt(Object, int, int) - Method in class org.jdesktop.swingx.decorator.Filter
Sets the specified value as the new value for the cell identified by the specified row and column index.
setValueAt(Object, int, int) - Method in class org.jdesktop.swingx.decorator.FilterPipeline
 
setValueAt(Object, int, int) - Method in class org.jdesktop.swingx.JXTable
Overridden to account for row index mapping.
setValueAt(Object, int, int) - Method in class org.jdesktop.swingx.JXTreeTable.TreeTableModelAdapter
 
setValueAt(Object, int) - Method in class org.jdesktop.swingx.treetable.AbstractMutableTreeTableNode
Sets the value for the given column.
setValueAt(Object, Object, int) - Method in class org.jdesktop.swingx.treetable.AbstractTreeTableModel
Sets the value for the node at columnIndex to value.
setValueAt(Object, int) - Method in class org.jdesktop.swingx.treetable.DefaultMutableTreeTableNode
Sets the value for the given column.
setValueAt(Object, Object, int) - Method in class org.jdesktop.swingx.treetable.DefaultTreeTableModel
Sets the value for the node at columnIndex to value.
setValueAt(Object, Object, int) - Method in class org.jdesktop.swingx.treetable.SimpleFileSystemModel
Sets the value for the node at columnIndex to value.
setValueAt(Object, Object, int) - Method in interface org.jdesktop.swingx.treetable.TreeTableModel
Sets the value for the node at columnIndex to value.
setValueAt(Object, int) - Method in interface org.jdesktop.swingx.treetable.TreeTableNode
Sets the value for the given column.
setValueAt(Object, int) - Method in class pt.uminho.anote2.carrot.linkage.gui.help.LabelClusterTreeTableNode
 
setValueAt(Object, int, int) - Method in class pt.uminho.generic.components.table.TableModelExtension
 
setValueAt(Object, int, int) - Method in class pt.uminho.generic.genericpanel.fluxdata.GenericFluxTableModel
 
setValueAt(Object, int, int) - Method in class pt.uminho.generic.genericpanel.tablesearcher.TableSearchModel
 
setValueIsAdjusting(boolean) - Method in class pt.uminho.generic.components.DefaultDoubleBoundedRangeModel
This attribute indicates that any upcoming changes to the value of the sizeModel should be considered a single event.
setValueIsAdjusting(boolean) - Method in interface pt.uminho.generic.components.DoubleBoundedRangeModel
This attribute indicates that any upcoming changes to the value of the sizeModel should be considered a single event.
setValues(T[]) - Method in class org.jdesktop.swingx.JXRadioGroup
 
setVariableNamesList(List<String>) - Method in class pt.uminho.generic.genericpanel.fluxdata.GenericFluxPanel
 
setVerbColor(String) - Static method in class pt.uminho.anote2.datastructures.utils.conf.OtherConfigurations
 
setVerbColorBackGround(String) - Static method in class pt.uminho.anote2.datastructures.utils.conf.OtherConfigurations
 
setVerbRelations(SortedMap<AnnotationPosition, Set<IEventAnnotation>>) - Method in class pt.uminho.anote2.aibench.corpus.datatypes.REDocumentAnnotation
 
setVersion(String) - Static method in class pt.uminho.anote2.aibench.resources.datastructures.ontologies.OBOOntologyExtensionv1p2
 
setVerticalAlignment(AbstractLayoutPainter.VerticalAlignment) - Method in class org.jdesktop.swingx.painter.AbstractLayoutPainter
Sets a new verticalAlignment alignment.
setVerticalAlignment(int) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setVerticalRepeat(boolean) - Method in class org.jdesktop.swingx.painter.ImagePainter
Sets if the image should be repeated vertically.
setVerticalTextPosition(int) - Method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
 
setView(Rectangle2D) - Method in class org.jdesktop.swingx.JXGraph
Sets the view of the graph.
setViewAndOrigin(Rectangle2D) - Method in class org.jdesktop.swingx.JXGraph
Sets the view and the origin of the graph at the same time.
setViewPrelimiraryInfo(boolean) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
 
setViewSelectionModel(ListSelectionModel) - Method in class org.jdesktop.swingx.decorator.DefaultSelectionMapper
sets the view selection model.
setViewSelectionModel(ListSelectionModel) - Method in interface org.jdesktop.swingx.decorator.SelectionMapper
sets the view selection model.
setViewSizeSequence(SizeSequence, int) - Method in class org.jdesktop.swingx.decorator.SizeSequenceMapper
 
setVisible(boolean) - Method in class org.jdesktop.swingx.JXDialog
Overridden to check if content is available.
setVisible(boolean) - Method in class org.jdesktop.swingx.JXFrame
 
setVisible(boolean) - Method in class org.jdesktop.swingx.JXGlassBox
 
setVisible(boolean) - Method in class org.jdesktop.swingx.MultiSplitLayout.Node
 
setVisible(boolean) - Method in class org.jdesktop.swingx.painter.AbstractPainter
Sets the visible property.
setVisible(boolean) - Method in class org.jdesktop.swingx.table.TableColumnExt
Sets the visible property.
setVisibleColumnCount(int) - Method in class org.jdesktop.swingx.JXTable
Sets the preferred number of Columns to show in a JScrollPane.
setVisibleRowCount(int) - Method in class org.jdesktop.swingx.JXTable
Sets the preferred number of rows to show in a JScrollPane.
setVisited(boolean) - Method in class org.jdesktop.swingx.hyperlink.AbstractHyperlinkAction
Set the visited property.
setVisited(boolean) - Method in class org.jdesktop.swingx.hyperlink.LinkModel
Sets a flag to indicate if the link has been visited.
setVisitingDelegate(ActionListener) - Method in class org.jdesktop.swingx.hyperlink.LinkModelAction
The delegate to invoke on actionPerformed.
setVolume(String) - Method in class pt.uminho.anote2.datastructures.documents.Publication
 
setWaitCursorVisible(boolean) - Method in class org.jdesktop.swingx.JXFrame
 
setWaiting(boolean) - Method in class org.jdesktop.swingx.JXFrame
 
setWaitPane(Component) - Method in class org.jdesktop.swingx.JXFrame
 
setWaitPaneVisible(boolean) - Method in class org.jdesktop.swingx.JXFrame
 
setWeight(double) - Method in class org.jdesktop.swingx.MultiSplitLayout.Divider
Dividers can't have a weight, they don't grow or shrink.
setWeight(double) - Method in class org.jdesktop.swingx.MultiSplitLayout.Node
The weight property is a between 0.0 and 1.0 used to compute how much space to add to this sibling when the layout grows or how much to reduce when the layout shrinks.
setWizard(Wizard<?>) - Method in class pt.uminho.generic.wizard2.WizardPanelDescriptor
 
setWrappee(ComponentProvider) - Method in class org.jdesktop.swingx.renderer.WrappingProvider
Sets the given provider as delegate for the node content.
setWrapping(boolean) - Method in class org.jdesktop.swingx.search.PatternModel
 
setWriteVisibleDataButton(boolean) - Method in class pt.uminho.generic.genericpanel.tablesearcher.searchPanel.CsvFileChooser
 
setX(double) - Method in class org.jdesktop.swingx.geom.Star2D
Sets location of the center of the star.
setX(A) - Method in interface pt.uminho.anote2.core.utils.IGenericPair
 
setX(A) - Method in class pt.uminho.anote2.datastructures.utils.GenericPair
 
setX(A) - Method in class pt.uminho.anote2.datastructures.utils.GenericPairC
 
setX(A) - Method in class pt.uminho.anote2.datastructures.utils.GenericPairComparable
 
setXmlProperties(String, ArrayList<GenericPairC<String, String>>) - Static method in class pt.uminho.anote2.datastructures.utils.conf.Configuration
Method that change xml properties
setY(double) - Method in class org.jdesktop.swingx.geom.Star2D
Sets the location of the center of the star.
setY(B) - Method in interface pt.uminho.anote2.core.utils.IGenericPair
 
setY(B) - Method in class pt.uminho.anote2.datastructures.utils.GenericPair
 
setY(B) - Method in class pt.uminho.anote2.datastructures.utils.GenericPairC
 
setY(B) - Method in class pt.uminho.anote2.datastructures.utils.GenericPairComparable
 
setYear(String) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.NewQueryProgress
 
setYearProgress(float) - Method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.NewQueryProgress
 
setZ(Z) - Method in class pt.uminho.anote2.datastructures.utils.GenericTriple
 
setZoomable(boolean) - Method in class org.jdesktop.swingx.JXMonthView
Sets the zoomable property.
ShadingColorHighlighter - Class in org.jdesktop.swingx.decorator
Experimental replacement of HierarchicalColumnHighligher.
ShadingColorHighlighter() - Constructor for class org.jdesktop.swingx.decorator.ShadingColorHighlighter
Instantiates a Highlighter with null colors using the default HighlightPredicate.
ShadingColorHighlighter(HighlightPredicate) - Constructor for class org.jdesktop.swingx.decorator.ShadingColorHighlighter
Instantiates a Highlighter with null colors using the specified HighlightPredicate.
ShadowPathEffect - Class in org.jdesktop.swingx.painter.effects
An effect which draws a shadow around the the painter's shape.
ShadowPathEffect() - Constructor for class org.jdesktop.swingx.painter.effects.ShadowPathEffect
Creates a new instance of ShadowPathEffect
ShadowRenderer - Class in org.jdesktop.swingx.graphics
A shadow renderer generates a drop shadow for any given picture, respecting the transparency channel if present.
ShadowRenderer() - Constructor for class org.jdesktop.swingx.graphics.ShadowRenderer
Creates a default good looking shadow generator.
ShadowRenderer(int, float, Color) - Constructor for class org.jdesktop.swingx.graphics.ShadowRenderer
A shadow renderer needs three properties to generate shadows.
ShapePainter - Class in org.jdesktop.swingx.painter
A Painter that paints java.awt.Shapes.
ShapePainter() - Constructor for class org.jdesktop.swingx.painter.ShapePainter
Create a new ShapePainter
ShapePainter(Shape) - Constructor for class org.jdesktop.swingx.painter.ShapePainter
Create a new ShapePainter with the specified shape.
ShapePainter(Shape, Paint) - Constructor for class org.jdesktop.swingx.painter.ShapePainter
Create a new ShapePainter with the specified shape and fillPaint.
ShapePainter(Shape, Paint, AbstractAreaPainter.Style) - Constructor for class org.jdesktop.swingx.painter.ShapePainter
Create a new ShapePainter with the specified shape and fillPaint.
ShapeUIResource - Class in org.jdesktop.swingx.plaf
An implementation of Shape that implements UIResource.
ShapeUIResource(Shape) - Constructor for class org.jdesktop.swingx.plaf.ShapeUIResource
Creates a new instance of PainterUIResource
ShapeUtils - Class in org.jdesktop.swingx.util
 
showDialog(Throwable) - Static method in class org.jdesktop.swingx.JXErrorPane
Constructs and shows the error dialog for the given exception.
showDialog(Component, ErrorInfo) - Static method in class org.jdesktop.swingx.JXErrorPane
Constructs and shows the error dialog, using the given ErrorInfo to initialize the view.
showDialog(Component, JXErrorPane) - Static method in class org.jdesktop.swingx.JXErrorPane
Constructs and shows the error dialog, using the given JXErrorPane for the view portion of the dialog.
showDialog(Component, String, MultipleGradientPaint) - Static method in class org.jdesktop.swingx.JXGradientChooser
This static utility method cannot be called from the ETD, or your application will lock up.
showDialog(Component) - Method in class org.jdesktop.swingx.JXTipOfTheDay
Pops up a "Tip of the day" dialog.
showDialog(Component, Preferences) - Method in class org.jdesktop.swingx.JXTipOfTheDay
Pops up a "Tip of the day" dialog.
showDialog(Component, Preferences, boolean) - Method in class org.jdesktop.swingx.JXTipOfTheDay
Pops up a "Tip of the day" dialog.
showDialog(Component, JXTipOfTheDay.ShowOnStartupChoice) - Method in class org.jdesktop.swingx.JXTipOfTheDay
Pops up a "Tip of the day" dialog.
showDialog(Component, JXTipOfTheDay.ShowOnStartupChoice, boolean) - Method in class org.jdesktop.swingx.JXTipOfTheDay
Pops up a "Tip of the day" dialog.
showDialog() - Method in class pt.uminho.generic.wizard2.Wizard
 
showErrorMessageDialog(String) - Static method in class pt.uminho.generic.defaultdialog.DefaultDialog
 
showFindBar(JComponent, Searchable) - Method in class org.jdesktop.swingx.search.SearchFactory
Show a incremental-find widget targeted at the searchable.
showFindDialog(JComponent, Searchable) - Method in class org.jdesktop.swingx.search.SearchFactory
Show a batch-find widget targeted at the given Searchable.
showFindInput(JComponent, Searchable) - Method in class org.jdesktop.swingx.search.SearchFactory
Shows an appropriate find widget targeted at the searchable.
showFrame(Throwable) - Static method in class org.jdesktop.swingx.JXErrorPane
Constructs and shows the error frame for the given exception.
showFrame(Component, ErrorInfo) - Static method in class org.jdesktop.swingx.JXErrorPane
Constructs and shows the error frame, using the given ErrorInfo to initialize the view.
showFrame(Component, JXErrorPane) - Static method in class org.jdesktop.swingx.JXErrorPane
Constructs and shows the error frame, using the given JXErrorPane for the view portion of the frame.
showInternalFrame(Throwable) - Static method in class org.jdesktop.swingx.JXErrorPane
Constructs and shows the error frame for the given exception.
showInternalFrame(Component, ErrorInfo) - Static method in class org.jdesktop.swingx.JXErrorPane
Constructs and shows the error frame, using the given ErrorInfo to initialize the view.
showInternalFrame(Component, JXErrorPane) - Static method in class org.jdesktop.swingx.JXErrorPane
Constructs and shows the error frame, using the given JXErrorPane for the view portion of the frame.
showLoginDialog(Component, LoginService) - Static method in class org.jdesktop.swingx.JXLoginPane
Shows a login dialog.
showLoginDialog(Component, LoginService, PasswordStore, UserNameStore) - Static method in class org.jdesktop.swingx.JXLoginPane
Shows a login dialog.
showLoginDialog(Component, LoginService, PasswordStore, UserNameStore, List<String>) - Static method in class org.jdesktop.swingx.JXLoginPane
Shows a login dialog.
showLoginDialog(Component, JXLoginPane) - Static method in class org.jdesktop.swingx.JXLoginPane
Shows a login dialog.
showLoginFrame(LoginService) - Static method in class org.jdesktop.swingx.JXLoginPane
Shows a login frame.
showLoginFrame(LoginService, PasswordStore, UserNameStore) - Static method in class org.jdesktop.swingx.JXLoginPane
 
showLoginFrame(LoginService, PasswordStore, UserNameStore, List<String>) - Static method in class org.jdesktop.swingx.JXLoginPane
 
showLoginFrame(JXLoginPane) - Static method in class org.jdesktop.swingx.JXLoginPane
 
ShowMessagePopup - Class in pt.uminho.anote2.aibench.utils.gui
 
ShowMessagePopup(String) - Constructor for class pt.uminho.anote2.aibench.utils.gui.ShowMessagePopup
 
showOnGlassPane(Container, Component, int, int, int) - Method in class org.jdesktop.swingx.JXGlassBox
Shows this glass box on the glass pane.
showOnGlassPane(Container, int, int) - Method in class org.jdesktop.swingx.JXGlassBox
Shows this glass box on the glass pane.
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.aibench.corpus.datatypes.Corpora
Presents a option pane with the given title, question and options
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.aibench.loadsave.operations.LoadCorpus
Presents a option pane with the given title, question and options
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.aibench.loadsave.operations.LoadPublicationManager
Presents a option pane with the given title, question and options
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.aibench.loadsave.operations.LoadResource
Presents a option pane with the given title, question and options
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.aibench.publicationmanager.dataStructures.PubMedSearchExtension
Presents a option pane with the given title, question and options
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.aibench.publicationmanager.datatypes.PublicationManager
Presents a option pane with the given title, question and options
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.aibench.resources.datatypes.Resources
Presents a option pane with the given title, question and options
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.aibench.utils.gui.guiUtils
Presents a option pane with the given title, question and options
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.aibench.utils.operations.HelpAibench
Presents a option pane with the given title, question and options
showOptionPane(String, String, Object[]) - Static method in class pt.uminho.anote2.carrot.linkage.views.ClustersQueryView
Presents a option pane with the given title, question and options
ShuttleSorter - Class in org.jdesktop.swingx.decorator
Pluggable sorting filter.
ShuttleSorter() - Constructor for class org.jdesktop.swingx.decorator.ShuttleSorter
 
ShuttleSorter(int, boolean) - Constructor for class org.jdesktop.swingx.decorator.ShuttleSorter
 
ShuttleSorter(int, boolean, Comparator) - Constructor for class org.jdesktop.swingx.decorator.ShuttleSorter
 
SILVER_VISUAL_STYLE - Static variable in class org.jdesktop.swingx.plaf.windows.WindowsLookAndFeelAddons
 
SimpleDialogView - Class in pt.uminho.anote2.aibench.utils.wizard
 
SimpleDialogView(List<Object>) - Constructor for class pt.uminho.anote2.aibench.utils.wizard.SimpleDialogView
 
SimpleDocument - Class in pt.uminho.anote2.datastructures.documents
 
SimpleDocument(int) - Constructor for class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
SimpleDocument(int, String, String, String) - Constructor for class pt.uminho.anote2.datastructures.documents.SimpleDocument
 
SimpleEntity - Class in pt.uminho.anote2.datastructures.annotation.ner
 
SimpleEntity(String, int, int) - Constructor for class pt.uminho.anote2.datastructures.annotation.ner.SimpleEntity
 
SimpleEvent - Class in pt.uminho.anote2.datastructures.annotation.re
 
SimpleEvent(String, SimpleEntity, SimpleEntity, boolean) - Constructor for class pt.uminho.anote2.datastructures.annotation.re.SimpleEvent
 
SimpleFileSystemModel - Class in org.jdesktop.swingx.treetable
A tree table model to simulate a file system.
SimpleFileSystemModel() - Constructor for class org.jdesktop.swingx.treetable.SimpleFileSystemModel
Creates a file system model, using the root directory as the model root.
SimpleFileSystemModel(File) - Constructor for class org.jdesktop.swingx.treetable.SimpleFileSystemModel
Creates a file system model, using the specified root as the model root.
SimpleLoginService - Class in org.jdesktop.swingx.auth
An implementation of LoginService that simply matches the username/password against a list of known users and their passwords.
SimpleLoginService(Map<String, char[]>) - Constructor for class org.jdesktop.swingx.auth.SimpleLoginService
Creates a new SimpleLoginService based on the given password map.
SimpleTimeLeft - Class in pt.uminho.anote2.aibench.utils.timeleft
 
SimpleTimeLeft() - Constructor for class pt.uminho.anote2.aibench.utils.timeleft.SimpleTimeLeft
 
SingleDaySelectionModel - Class in org.jdesktop.swingx.calendar
DateSelectionModel which allows a single selection only.
SingleDaySelectionModel() - Constructor for class org.jdesktop.swingx.calendar.SingleDaySelectionModel
Instantiates a SingleDaySelectionModel with default locale.
SingleDaySelectionModel(Locale) - Constructor for class org.jdesktop.swingx.calendar.SingleDaySelectionModel
Instantiates a SingleSelectionModel with the given locale.
singleTermBoost - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsPropertiesNames
 
size() - Method in class pt.uminho.anote2.aibench.corpus.datatypes.Corpus
 
size() - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeOntology
 
size() - Method in interface pt.uminho.anote2.core.document.ICorpus
 
size() - Method in interface pt.uminho.anote2.core.document.IDocumentSet
 
size() - Method in class pt.uminho.anote2.datastructures.documents.DocumentSet
 
size() - Method in class pt.uminho.anote2.datastructures.resources.ResourceElementSet
 
size() - Method in class pt.uminho.anote2.datastructures.utils.multithearding.JobQueue
 
size() - Method in class pt.uminho.anote2.datastructures.utils.OrderedMap
 
size() - Method in interface pt.uminho.anote2.datastructures.utils.tree.InterfaceTree
 
size() - Method in interface pt.uminho.anote2.resource.IResourceElementSet
 
SIZE_CHANGED_PROPERTY - Static variable in class org.jdesktop.swingx.graphics.ShadowRenderer
Identifies a change to the size used to render the shadow.
sizeColumnsToFit(int) - Method in class org.jdesktop.swingx.JXTreeTable
Overriden to invoke supers implementation, and then, if the receiver is editing a Tree column, the editors bounds is reset.
SizeSequenceMapper - Class in org.jdesktop.swingx.decorator
 
SizeSequenceMapper() - Constructor for class org.jdesktop.swingx.decorator.SizeSequenceMapper
 
SizeSequenceMapper(FilterPipeline) - Constructor for class org.jdesktop.swingx.decorator.SizeSequenceMapper
 
SizeSequenceMapper(FilterPipeline, SizeSequence, int) - Constructor for class org.jdesktop.swingx.decorator.SizeSequenceMapper
 
smallHeight - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
 
smallWidth - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
 
SoftBurn - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
 
SoftDodge - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
 
SoftLight - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
 
SORT_ORDER_CHANGED - Static variable in class org.jdesktop.swingx.decorator.PipelineEvent
Identifies a order change of the interactive sorter.
SortArrowIcon - Class in org.jdesktop.swingx.icon
 
SortArrowIcon(boolean) - Constructor for class org.jdesktop.swingx.icon.SortArrowIcon
 
SortController - Interface in org.jdesktop.swingx.decorator
Defines the interactive sort control for a table.
Sorter - Class in org.jdesktop.swingx.decorator
Pluggable sorting filter.
Sorter() - Constructor for class org.jdesktop.swingx.decorator.Sorter
 
Sorter(int, boolean) - Constructor for class org.jdesktop.swingx.decorator.Sorter
 
Sorter(int, boolean, Comparator) - Constructor for class org.jdesktop.swingx.decorator.Sorter
 
SortKey - Class in org.jdesktop.swingx.decorator
A column and how its sorted.
SortKey(SortOrder, int) - Constructor for class org.jdesktop.swingx.decorator.SortKey
 
SortKey(SortOrder, int, Comparator) - Constructor for class org.jdesktop.swingx.decorator.SortKey
 
SortOrder - Class in org.jdesktop.swingx.decorator
Encasulates sort state.
Source - Class in pt.uminho.anote2.datastructures.utils
 
Source(int, String) - Constructor for class pt.uminho.anote2.datastructures.utils.Source
 
sourceQueries - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalNames
 
sources - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTablesName
 
sourcesLinkage - Variable in class pt.uminho.anote2.datastructures.utils.MenuItem
 
SPECIAL_CHANGED_KEY - Static variable in class org.jdesktop.swingx.JXTaskPane
Used when generating PropertyChangeEvents for the "special" property
SQLLiteDatabase - Class in pt.uminho.anote2.datastructures.database
 
SQLLiteDatabase(String, String, String, String, String) - Constructor for class pt.uminho.anote2.datastructures.database.SQLLiteDatabase
 
StackBlurFilter - Class in org.jdesktop.swingx.image
A stack blur filter can be used to create an approximation of a gaussian blur.
StackBlurFilter() - Constructor for class org.jdesktop.swingx.image.StackBlurFilter
Creates a new blur filter with a default radius of 3 and 3 iterations.
StackBlurFilter(int) - Constructor for class org.jdesktop.swingx.image.StackBlurFilter
Creates a new blur filter with the specified radius and 3 iterations.
StackBlurFilter(int, int) - Constructor for class org.jdesktop.swingx.image.StackBlurFilter
Creates a new blur filter with the specified radius.
StackLayout - Class in org.jdesktop.swingx
StackLayout is a Swing layout aimed to act as the layers stack of most popuplar graphics editing tools like The GIMP or Photoshop.
StackLayout() - Constructor for class org.jdesktop.swingx.StackLayout
 
Stamp - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
 
StanfordPosTagger - Class in pt.uminho.anote2.relation.gate
 
StanfordPosTagger() - Constructor for class pt.uminho.anote2.relation.gate.StanfordPosTagger
 
StanfordPosTagger(IDirectionality, IPolarity, LexicalWords, LexicalWords) - Constructor for class pt.uminho.anote2.relation.gate.StanfordPosTagger
 
Star2D - Class in org.jdesktop.swingx.geom
This class provides a star shape.
Star2D(double, double, double, double, int) - Constructor for class org.jdesktop.swingx.geom.Star2D
Creates a new star whose center is located at the specified x and y coordinates.
start() - Method in class pt.uminho.anote2.aibench.corpus.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.aibench.curator.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.aibench.loadsave.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.aibench.ner.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.aibench.publicationmanager.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.aibench.resources.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.aibench.utils.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.aibench.utils.lifecycle.LifecycleOSX
 
start() - Method in class pt.uminho.anote2.carrot.linkage.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.corpusloaders.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.nergate.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.relation.cooccurrence.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.relation.lifecycle.Lifecycle
 
start() - Method in class pt.uminho.anote2.workflow.lifecycle.Lifecycle
 
startAuthentication(String, char[], String) - Method in class org.jdesktop.swingx.auth.LoginService
This method starts the authentication process and is either synchronous or asynchronous based on the synchronous property
startEditingAtPath(TreePath) - Method in class org.jdesktop.swingx.JXTree
Overridden to fix focus issues with editors.
startOfDay(Calendar, Date) - Static method in class org.jdesktop.swingx.calendar.CalendarUtils
Adjust the given calendar to the first millisecond of the given date.
startOfDay(Calendar) - Static method in class org.jdesktop.swingx.calendar.CalendarUtils
Adjust the given calendar to the first millisecond of the current day.
startOfDay(Date) - Static method in class org.jdesktop.swingx.calendar.DateUtils
Returns a new Date with the hours, milliseconds, seconds and minutes set to 0.
startOfDayInMillis(long) - Static method in class org.jdesktop.swingx.calendar.DateUtils
Returns day in millis with the hours, milliseconds, seconds and minutes set to 0.
startOffset - Variable in class pt.uminho.anote2.datastructures.documents.Sentence
 
startOfMonth(Calendar) - Static method in class org.jdesktop.swingx.calendar.CalendarUtils
Adjusts the calendar to the start of the current month.
startOfWeek(Calendar) - Static method in class org.jdesktop.swingx.calendar.CalendarUtils
Adjusts the calendar to the start of the current week.
startOfWeek(Calendar, Date) - Static method in class org.jdesktop.swingx.calendar.CalendarUtils
Adjusts the calendar to the start of the current week.
starttime - Static variable in class pt.uminho.anote2.datastructures.database.ADatabase
 
StartWizart1 - Class in pt.uminho.anote2.aibench.utils.firstrun
 
StartWizart1(List<Object>) - Constructor for class pt.uminho.anote2.aibench.utils.firstrun.StartWizart1
 
StartWizart2 - Class in pt.uminho.anote2.aibench.utils.firstrun
 
StartWizart2(List<Object>) - Constructor for class pt.uminho.anote2.aibench.utils.firstrun.StartWizart2
 
StartWizart3 - Class in pt.uminho.anote2.aibench.utils.firstrun
This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
StartWizart3(List<Object>) - Constructor for class pt.uminho.anote2.aibench.utils.firstrun.StartWizart3
 
StartWizart4 - Class in pt.uminho.anote2.aibench.utils.firstrun
 
StartWizart4(List<Object>) - Constructor for class pt.uminho.anote2.aibench.utils.firstrun.StartWizart4
 
stateChanged(ChangeEvent) - Method in class org.jdesktop.swingx.plaf.basic.BasicHyperlinkUI.BasicHyperlinkListener
 
stateChanged(ChangeEvent) - Method in class pt.uminho.generic.components.JSliderDouble
 
statistics - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfoSmall
 
StatusBarAddon - Class in org.jdesktop.swingx.plaf
Addon for JXStatusBar.
StatusBarAddon() - Constructor for class org.jdesktop.swingx.plaf.StatusBarAddon
 
StatusBarUI - Class in org.jdesktop.swingx.plaf
Pluggable look and feel interface for StatusBar.
StatusBarUI() - Constructor for class org.jdesktop.swingx.plaf.StatusBarUI
 
STCDocumentCountBoostDefaultValue - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCDocumentCountBoostMax - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCDocumentCountBoostMin - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCDocumentCountBoostStep - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMaxBaseClustersDefaultValue - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMaxBaseClustersMax - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMaxBaseClustersMin - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMaxBaseClustersStep - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMinBaseClusterScoreDefaultValue - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMinBaseClusterScoreMax - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMinBaseClusterScoreMin - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMinBaseClusterScoreStep - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMinBaseClusterSizeDefaultValue - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMinBaseClusterSizeMax - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMinBaseClusterSizeMin - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCMinBaseClusterSizeStep - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCOptimalPhraseLengthDefaultValue - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCOptimalPhraseLengthMax - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCOptimalPhraseLengthMin - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCOptimalPhraseLengthStep - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCScoreWeightDefaultValue - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCScoreWeightDivisionNumber - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCScoreWeightLabels - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCScoreWeightMax - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCScoreWeightMin - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
STC
STCScoreWeightStep - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCSingleTermBoostDefaultValue - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCSingleTermBoostMax - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCSingleTermBoostMin - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCSingleTermBoostStep - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
STCUseQueryInformation - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
 
stop() - Method in class pt.uminho.anote2.datastructures.annotation.ner.MergeNERSchemas
 
stop() - Method in class pt.uminho.anote2.datastructures.process.IEProcess
 
stop() - Method in class pt.uminho.anote2.ner.ner.NER
 
stop() - Method in class pt.uminho.anote2.ner.ner.NERCorpusPipeline
 
stop() - Method in class pt.uminho.anote2.ner.ner.NERPreProcessingPOSTagging
 
stop() - Method in class pt.uminho.anote2.ner.ner.NERPreProcessingPOSTaggingAndStopWords
 
stop() - Method in class pt.uminho.anote2.ner.ner.NERPreProcessingStopWords
 
stop() - Method in class pt.uminho.anote2.nergate.abner.ABNER
 
stop() - Method in class pt.uminho.anote2.nergate.chemistrytagger.ChemistryTagger
 
stop() - Method in interface pt.uminho.anote2.process.IE.INERProcess
 
stop() - Method in interface pt.uminho.anote2.process.IE.IREProcess
 
stop() - Method in interface pt.uminho.anote2.process.IProcess
 
stop() - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedCrawl
 
stop() - Method in class pt.uminho.anote2.process.ir.pubmed.PubMedSearch
 
stop() - Method in class pt.uminho.anote2.relation.cooccurrence.core.ARECooccurrence
 
stop() - Method in class pt.uminho.anote2.relation.core.gate.RelationsExtraction
 
stop() - Method in class pt.uminho.anote2.workflow.processes.WorkflowNER
 
stop() - Method in class pt.uminho.anote2.workflow.processes.WorkflowRE
 
stopCellEditing() - Method in class org.jdesktop.swingx.autocomplete.ComboBoxCellEditor
Tells the combo box to stop editing and accept any partially edited value as the value of the combo box.
stopCellEditing() - Method in class org.jdesktop.swingx.JXTable.GenericEditor
 
stopCellEditing() - Method in class org.jdesktop.swingx.table.DatePickerCellEditor
Overridden to commit pending edits.
stopCellEditing() - Method in class org.jdesktop.swingx.table.NumberEditorExt
 
stopCellEditing() - Method in class pt.uminho.generic.genericpanel.buttons.ButtonTableCellEditor
 
stopWords - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalNames
NER Options
stopWordsResourceID - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalNames
 
store(OutputStream) - Method in class org.jdesktop.swingx.auth.KeyChain
Persists the KeyChain to an OutputStream
stringToKey(String) - Static method in class org.jdesktop.swingx.util.Utilities
Construct a new key description from a given universal string description.
stringToKeys(String) - Static method in class org.jdesktop.swingx.util.Utilities
Convert a space-separated list of Emacs-like key binding names to a list of Swing key strokes.
stringToValue(String) - Method in class org.jdesktop.swingx.calendar.DatePickerFormatter
StringValue - Interface in org.jdesktop.swingx.renderer
A simple converter to return a String representation of an object.
StringValues - Class in org.jdesktop.swingx.renderer
A collection of common StringValue implementations.
subitems - Variable in class pt.uminho.anote2.datastructures.utils.MenuItem
 
Subtract - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
 
superExternalIDCurator - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesExternalLinks
 
superHeight - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
 
superWidth - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
 
sustituir(String, String, String) - Static method in class es.uvigo.ei.pdfDownloader.Comun
 
swapHashElements(Map<? extends Object, ? extends Object>) - Static method in class pt.uminho.anote2.datastructures.utils.Utils
Swap element of a Hash
swapNodes(InterfaceNode<T>, InterfaceNode<T>) - Method in interface pt.uminho.anote2.datastructures.utils.tree.InterfaceTree
 
SwingXUtilities - Class in org.jdesktop.swingx
A collection of utility methods for Swing(X) classes.
synonyms - Static variable in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.csv.ColumnNames
 
synonymSize - Static variable in class pt.uminho.anote2.datastructures.database.schema.TableResourcesElements
 
SynonymsTreeNode - Class in pt.uminho.anote2.aibench.corpus.gui.help.treenodes
 
SynonymsTreeNode(String, int) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.help.treenodes.SynonymsTreeNode
 
SynonymTreeNode - Class in pt.uminho.anote2.aibench.corpus.gui.help.treenodes
 
SynonymTreeNode(String, int) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.help.treenodes.SynonymTreeNode
 

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