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calculateGradient() - Method in class org.jdesktop.swingx.color.GradientPreviewPanel
calculatePreferredSize() - Method in class org.jdesktop.swingx.plaf.basic.BasicErrorPaneUI
calculatePreferredSize() - Method in class org.jdesktop.swingx.plaf.ErrorPaneUI: Calculates default prefered size for JXErrorPane on given platform/LAF.
CalendarRenderingHandler - Interface in org.jdesktop.swingx.plaf.basic: The RenderingHandler responsible for text rendering.
CalendarState - Enum in org.jdesktop.swingx.plaf.basic: States of a Day in a MonthView page.
CalendarUtils - Class in org.jdesktop.swingx.calendar: Calendar manipulation.
CalendarUtils() - Constructor for class org.jdesktop.swingx.calendar.CalendarUtils
CallLookupTablesOp - Class in pt.uminho.anote2.aibench.curator.utils
CallLookupTablesOp() - Constructor for class pt.uminho.anote2.aibench.curator.utils.CallLookupTablesOp
cancel(boolean) - Method in class es.uvigo.ei.sing.BioSearch.connection.PubMex
cancel() - Method in class org.jdesktop.swingx.JXFindBar: Action callback method for bound action JXDialog.CLOSE_ACTION_COMMAND.
cancel() - Method in class pt.uminho.anote2.aibench.corpus.operations.ExportRESchemaToXGMMLOperation
cancel() - Method in class pt.uminho.anote2.aibench.corpus.operations.NERAnnotationsMergeOperation
cancel() - Method in class pt.uminho.anote2.aibench.ner.operations.OperationApplySameNERAnote
cancel() - Method in class pt.uminho.anote2.aibench.ner.operations.OperationNerAnote
cancel() - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.JournalRetrivalListDocs
cancel() - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.PubmedSearchOperation
cancel() - Method in class pt.uminho.anote2.aibench.publicationmanager.operations.UpdateQueryOperation
cancel() - Method in class pt.uminho.anote2.aibench.resources.datastructures.ontologies.OBOOntologyExtensionv1p2
cancel() - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UpdateDictionaryBiowareHouse
cancel() - Method in class pt.uminho.anote2.aibench.resources.operations.dics.UploadDicionary
cancel() - Method in class pt.uminho.anote2.aibench.resources.operations.ontologies.LoadOBOOntologyv1p0
cancel() - Method in class pt.uminho.anote2.aibench.resources.operations.ontologies.LoadOBOOntologyv1p2
cancel() - Method in class pt.uminho.anote2.nergate.operations.OperationNERAbner
cancel() - Method in class pt.uminho.anote2.nergate.operations.OperationNERChemistryTagging
cancel() - Method in class pt.uminho.anote2.process.ir.pubmed.PubMexAnote
cancel() - Method in class pt.uminho.anote2.relation.cooccurrence.operations.OperationRECooccurrence
cancel() - Method in class pt.uminho.anote2.relation.operations.OperationRelationExtraction
cancel() - Method in class pt.uminho.anote2.workflow.operations.WorkflowBasicOperation
cancel() - Method in class pt.uminho.anote2.workflow.operations.WorkflowGeneralOperation
cancel() - Method in class pt.uminho.anote2.workflow.operations.WorkflowQueryOperation
CANCEL_BUTTON_ACTION_COMMAND - Static variable in class pt.uminho.anote2.aibench.utils.conf.propertiesmanager.OkCancelMiniPanel
CANCEL_BUTTON_ACTION_COMMAND - Static variable in class pt.uminho.generic.wizard2.DefinitionsWizard
CANCEL_BUTTON_TEXT - Static variable in class pt.uminho.generic.wizard2.DefinitionsWizard
CANCEL_KEY - Static variable in class org.jdesktop.swingx.JXDatePicker: action command used for cancel actionEvent.
CANCEL_KEY - Static variable in class org.jdesktop.swingx.JXMonthView: action command used for cancel actionEvent.
CANCEL_LOGIN_ACTION_COMMAND - Static variable in class org.jdesktop.swingx.JXLoginPane: Action key for an Action in the ActionMap that cancels the Login procedure
cancelAuthentication() - Method in class org.jdesktop.swingx.auth.LoginService: Notifies the LoginService that an already running authentication request should be cancelled.
cancelEdit() - Method in class org.jdesktop.swingx.JXDatePicker: Cancels the editor's changes and notifies ActionListeners.
cancelled() - Method in interface es.uvigo.ei.sing.BioSearch.connection.PubMexProgressHandler
cancelSelection() - Method in class org.jdesktop.swingx.JXMonthView: Cancels the selection.
CapsulePainter - Class in org.jdesktop.swingx.painter: Draws a capsule.
CapsulePainter() - Constructor for class org.jdesktop.swingx.painter.CapsulePainter: Create a new CapsulePainter that draws a full capsule.
CapsulePainter(CapsulePainter.Portion) - Constructor for class org.jdesktop.swingx.painter.CapsulePainter: Create a new CapsulePainter that only draws the portion specified.
CapsulePainter.Portion - Enum in org.jdesktop.swingx.painter
Cardinality - Class in pt.uminho.anote2.datastructures.process.re.export.configuration: Class for represent a relation cardinality Representation 0 - Zero 1 - One -1 - To Many
Cardinality(int, int) - Constructor for class pt.uminho.anote2.datastructures.process.re.export.configuration.Cardinality
CarrotClusterAlgorithmsEnum - Enum in pt.uminho.anote2.carrot.linkage.datastructures
CarrotDatabaseLinkage - Class in pt.uminho.anote2.carrot.linkage.datastructures
CarrotDatabaseLinkage() - Constructor for class pt.uminho.anote2.carrot.linkage.datastructures.CarrotDatabaseLinkage
CarrotRunClusterAlgorithms - Class in pt.uminho.anote2.carrot.linkage.datastructures
CarrotRunClusterAlgorithms() - Constructor for class pt.uminho.anote2.carrot.linkage.datastructures.CarrotRunClusterAlgorithms
cas - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalSources
CASE_SENSITIVE - Static variable in class pt.uminho.anote2.aibench.ner.settings.NERLexicalResourcesDefaultSettings
CASE_SENSITIVE - Static variable in class pt.uminho.anote2.workflow.settings.basic.WorkflowBasicsDefaulSettings
CASE_SENSITIVE - Static variable in class pt.uminho.anote2.workflow.settings.general.WorkflowGeneralDefaulSettings
CASE_SENSITIVE - Static variable in class pt.uminho.anote2.workflow.settings.query.WorkflowQueryDefaulSettings
Case_Sensitive_Pressed - Static variable in class pt.uminho.generic.genericpanel.tablesearcher.searchPanel.SearchBasicOptionsPanel
casesensitive - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalNames
CellContext - Class in org.jdesktop.swingx.renderer: Encapsulates a snapshop of cell content and default display context for usage by a ComponentProvider.
CellContext() - Constructor for class org.jdesktop.swingx.renderer.CellContext
CHANGE_BUTTON_COMAND - Static variable in class pt.uminho.generic.genericpanel.tablesearcher.SelectColumnPanel
changeActiveStatus(boolean) - Method in interface pt.uminho.anote2.core.report.resources.IResourceReport
changeActiveStatus(boolean) - Method in class pt.uminho.anote2.datastructures.report.resources.ResourceReport
ChangeClassColor - Class in pt.uminho.anote2.aibench.corpus.operations
ChangeClassColor() - Constructor for class pt.uminho.anote2.aibench.corpus.operations.ChangeClassColor
ChangeClassColorDocumentsOperation - Class in pt.uminho.anote2.aibench.corpus.operations
ChangeClassColorDocumentsOperation() - Constructor for class pt.uminho.anote2.aibench.corpus.operations.ChangeClassColorDocumentsOperation
ChangeCuratorExtenalLinksMenu - Class in pt.uminho.anote2.aibench.curator.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
ChangeCuratorExtenalLinksMenu() - Constructor for class pt.uminho.anote2.aibench.curator.gui.ChangeCuratorExtenalLinksMenu
changed() - Method in class pt.uminho.anote2.aibench.curator.view.ANoteDocumentView
ChangeDBSettingsGUI - Class in pt.uminho.anote2.aibench.utils.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
ChangeDBSettingsGUI() - Constructor for class pt.uminho.anote2.aibench.utils.gui.ChangeDBSettingsGUI
ChangeDBSettingsOperation - Class in pt.uminho.anote2.aibench.utils.operations
ChangeDBSettingsOperation() - Constructor for class pt.uminho.anote2.aibench.utils.operations.ChangeDBSettingsOperation
ChangeLexicalWordGUI - Class in pt.uminho.anote2.aibench.resources.gui
ChangeLexicalWordGUI(LexicalWordsAibench, JList, String) - Constructor for class pt.uminho.anote2.aibench.resources.gui.ChangeLexicalWordGUI
changeOkButtonName(String) - Method in class pt.uminho.anote2.aibench.utils.gui.DialogGenericView
changePerformedStatus(boolean) - Method in interface pt.uminho.anote2.core.report.resources.IResourceReport
changePerformedStatus(boolean) - Method in class pt.uminho.anote2.datastructures.report.resources.ResourceReport
changePriorety(IResourceElement, IResourceElement) - Method in class pt.uminho.anote2.aibench.resources.datatypes.RulesAibench
changePriorety - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.rules.QueriesRules
ChangeProxySettingsGUI - Class in pt.uminho.anote2.aibench.utils.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
ChangeProxySettingsGUI() - Constructor for class pt.uminho.anote2.aibench.utils.gui.ChangeProxySettingsGUI
ChangeProxySettingsOperation - Class in pt.uminho.anote2.aibench.utils.operations
ChangeProxySettingsOperation() - Constructor for class pt.uminho.anote2.aibench.utils.operations.ChangeProxySettingsOperation
changeRelevanceListner() - Method in interface pt.uminho.anote2.aibench.publicationmanager.datatypes.listeners.IChangeRelevancePublicationsListener
changeRelevanceListner() - Method in class pt.uminho.anote2.aibench.publicationmanager.views.QueryRelevanceView
ChangeResourcesGUI - Class in pt.uminho.anote2.aibench.curator.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
ChangeResourcesGUI(NERDocumentAnnotation, IResource<IResourceElement>) - Constructor for class pt.uminho.anote2.aibench.curator.gui.ChangeResourcesGUI
ChangeSettings - Class in pt.uminho.anote2.aibench.utils.operations
ChangeSettings() - Constructor for class pt.uminho.anote2.aibench.utils.operations.ChangeSettings
changeSolveStatus(boolean) - Method in interface pt.uminho.anote2.core.report.resources.IInsertConflits
changeSolveStatus(boolean) - Method in class pt.uminho.anote2.datastructures.report.resources.ResourceMergeConflits
changeTermClassID(int) - Method in class pt.uminho.anote2.datastructures.resources.ResourceElement
changeTermClassID(int) - Method in interface pt.uminho.anote2.resource.IResourceElement
ChangeVerbBackgroundColorOperation - Class in pt.uminho.anote2.aibench.corpus.operations
ChangeVerbBackgroundColorOperation() - Constructor for class pt.uminho.anote2.aibench.corpus.operations.ChangeVerbBackgroundColorOperation
CharSequenceGUI - Class in pt.uminho.anote2.aibench.resources.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CharSequenceGUI(CreateRuleGUI) - Constructor for class pt.uminho.anote2.aibench.resources.gui.CharSequenceGUI
cheackFiles(File, String) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCyc
Chebi - Class in pt.uminho.anote2.datastructures.resources.Dictionary.Loaders
Chebi(IDictionary) - Constructor for class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.Chebi
chebi - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalSources
ChebiExtension - Class in pt.uminho.anote2.aibench.resources.datastructures
ChebiExtension(IDictionary, boolean, TimeLeftProgress) - Constructor for class pt.uminho.anote2.aibench.resources.datastructures.ChebiExtension
checkAllFile(File, String) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.Kegg
CheckBoxProvider - Class in org.jdesktop.swingx.renderer: A component provider which uses a JCheckBox.
CheckBoxProvider() - Constructor for class org.jdesktop.swingx.renderer.CheckBoxProvider: Instantiates a CheckBoxProvider with default properties.
CheckBoxProvider(StringValue) - Constructor for class org.jdesktop.swingx.renderer.CheckBoxProvider: Instantiates a CheckBoxProvider with the given StringValue and default alignment.
CheckBoxProvider(StringValue, int) - Constructor for class org.jdesktop.swingx.renderer.CheckBoxProvider: Instantiates a CheckBoxProvider with the given StringValue and alignment.
checkDividers(MultiSplitLayout.Split) - Method in class org.jdesktop.swingx.MultiSplitLayout.Split: Check the dividers to ensure that redundant dividers are hidden and do not interfere in the layout, for example when all the children of a split are hidden (the split is then invisible), so two dividers may otherwise appear next to one another.
CheckerboardPainter - Class in org.jdesktop.swingx.painter: A Painter implementation that paints a checkerboard pattern.
CheckerboardPainter() - Constructor for class org.jdesktop.swingx.painter.CheckerboardPainter: Create a new CheckerboardPainter.
CheckerboardPainter(Paint, Paint) - Constructor for class org.jdesktop.swingx.painter.CheckerboardPainter: Create a new CheckerboardPainter with the specified light and dark paints.
CheckerboardPainter(Paint, Paint, double) - Constructor for class org.jdesktop.swingx.painter.CheckerboardPainter: Create a new CheckerboardPainter with the specified light and dark paints and the specified square size.
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.brenda.Brenda
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCycCompound
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCycEnzyme
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCycGene
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCycPathways
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCycProtein
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCycReaction
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.Chebi
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.entrezgene.EntrezGene
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.KeggCompound
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.KeggEnzymes
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.KeggGenes
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.KeggReactions
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.NcbiTaxonomy
checkFile(File) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.UniProt
checkFile(File) - Method in interface pt.uminho.anote2.resource.dictionary.IDicionaryFlatFilesLoader
checkForUpdatesURL - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
ChemistryTagger - Class in pt.uminho.anote2.nergate.chemistrytagger
ChemistryTagger(ICorpus, String, String, Properties, TimeLeftProgress, boolean, boolean, boolean) - Constructor for class pt.uminho.anote2.nergate.chemistrytagger.ChemistryTagger
ChemistryTaggerGUI - Class in pt.uminho.anote2.nergate.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
ChemistryTaggerGUI() - Constructor for class pt.uminho.anote2.nergate.gui.ChemistryTaggerGUI
chemistryTaggerInfo - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfo
children() - Method in class org.jdesktop.swingx.treetable.AbstractMutableTreeTableNode: Returns an enumeration this node's children.
children() - Method in interface org.jdesktop.swingx.treetable.MutableTreeTableNode: Returns an enumeration this node's children.
children() - Method in interface org.jdesktop.swingx.treetable.TreeTableNode: Returns an enumeration this node's children.
children(InterfaceNode<T>) - Method in interface pt.uminho.anote2.datastructures.utils.tree.InterfaceTree
CHOOSE_FILE - Static variable in class pt.uminho.anote2.aibench.loadsave.gui.SaveGUI
CHOOSE_FILE - Static variable in class pt.uminho.anote2.aibench.resources.gui.ImportDictionaryTermsFromCSVFileGUI
CHOOSE_FILE - Static variable in class pt.uminho.anote2.aibench.resources.gui.ImportLexicalWordTermsFromCSVFileGUI
CHOOSE_FILE - Static variable in class pt.uminho.anote2.aibench.resources.gui.ImportLookupTermsFromCSVFileGUI
CHOOSE_FILE - Static variable in class pt.uminho.anote2.aibench.resources.gui.OntologyOBO12LoaderGUI
CHOOSE_FILE - Static variable in class pt.uminho.anote2.aibench.resources.gui.OntologyOBOLoaderGUI
CHOOSE_FILE_ACTION_COMMAND - Static variable in class pt.uminho.generic.genericpanel.filechooser.FileChooserAibench
ChooseClassColorGUI - Class in pt.uminho.anote2.aibench.corpus.gui
ChooseClassColorGUI(int, String) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.ChooseClassColorGUI
ChooseColorGUI - Class in pt.uminho.anote2.aibench.corpus.gui
ChooseColorGUI(String, String, int) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.ChooseColorGUI
ChooseVerbBackgroundColorGUI - Class in pt.uminho.anote2.aibench.corpus.gui
ChooseVerbBackgroundColorGUI(String) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.ChooseVerbBackgroundColorGUI
ChooseVerbColorGUI - Class in pt.uminho.anote2.aibench.corpus.gui
ChooseVerbColorGUI(String) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.ChooseVerbColorGUI
ChoseDelimitersPanel - Class in pt.uminho.generic.genericpanel.delimiters
ChoseDelimitersPanel() - Constructor for class pt.uminho.generic.genericpanel.delimiters.ChoseDelimitersPanel
classe - Static variable in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.csv.ColumnNames
ClassEditGUI - Class in pt.uminho.anote2.aibench.corpus.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
ClassEditGUI() - Constructor for class pt.uminho.anote2.aibench.corpus.gui.ClassEditGUI
ClassEntities - Class in pt.uminho.anote2.aibench.corpus.stats
ClassEntities() - Constructor for class pt.uminho.anote2.aibench.corpus.stats.ClassEntities
classes - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTablesName
classeSize - Static variable in class pt.uminho.anote2.datastructures.database.schema.TableResourcesElements
CLASSIC_LINE_PRINTER - Static variable in class org.jdesktop.swingx.decorator.HighlighterFactory
classIdsAllowed - Variable in class pt.uminho.anote2.datastructures.process.re.export.configuration.REToNetworkConfigurationEntityOptions
ClassnotExistExeption - Exception in pt.uminho.anote2.datastructures.exceptions
ClassnotExistExeption(String) - Constructor for exception pt.uminho.anote2.datastructures.exceptions.ClassnotExistExeption
classNumberAnnotationsCorpus - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.Stats.NERQueriesStats
classNumberAnnotationsPublication - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.Stats.NERQueriesStats
ClassNumberOfOccurrences - Class in pt.uminho.anote2.aibench.corpus.stats
ClassNumberOfOccurrences(int, int) - Constructor for class pt.uminho.anote2.aibench.corpus.stats.ClassNumberOfOccurrences
ClassPerDocumentListNode - Class in pt.uminho.anote2.aibench.corpus.gui.help.listnodes
ClassPerDocumentListNode(int, int, int) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.help.listnodes.ClassPerDocumentListNode
ClassProperties - Class in pt.uminho.anote2.datastructures.general
ClassProperties() - Constructor for class pt.uminho.anote2.datastructures.general.ClassProperties
ClassTreeNode - Class in pt.uminho.anote2.aibench.corpus.gui.help.treenodes
ClassTreeNode(String, int, int) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.help.treenodes.ClassTreeNode
cleanALL() - Method in class pt.uminho.anote2.relation.gate.Gate7PosTagger
cleanALL() - Method in class pt.uminho.anote2.relation.gate.LingPipePosTagger
cleanALL() - Method in interface pt.uminho.gate.process.IGatePosTagger
cleanString(String) - Method in class pt.uminho.anote2.datastructures.utils.HTMLCodes
clear() - Method in class pt.uminho.anote2.datastructures.utils.multithearding.JobQueue
clearCache() - Method in class org.jdesktop.swingx.painter.AbstractPainter: Call this method to clear the cacheable.
clearCache() - Method in class org.jdesktop.swingx.painter.CompoundPainter: Clears the cache of this Painter, and all child Painters.
clearFlaggedDates() - Method in class org.jdesktop.swingx.JXMonthView: Clears all flagged dates.
clearLocalCache() - Method in class org.jdesktop.swingx.painter.CompoundPainter: Clears the cache of this painter only, and not of any of the children.
clearModelSelection() - Method in class org.jdesktop.swingx.decorator.DefaultSelectionMapper
clearModelSelection() - Method in interface org.jdesktop.swingx.decorator.SelectionMapper
clearModelSizes() - Method in class org.jdesktop.swingx.decorator.SizeSequenceMapper
clearNonVisibleStringList() - Method in class pt.uminho.generic.components.table.tablelineremover.TableModelLineRemover
clearRemove() - Method in class pt.uminho.generic.components.table.tableremover.TableModelColumnRemover
clearSearch() - Method in class pt.uminho.generic.components.table.tablesearcher.TableModelSearcher
clearSelection() - Method in interface org.jdesktop.swingx.calendar.DateSelectionModel: Clears any selection from the selection model.
clearSelection() - Method in class org.jdesktop.swingx.calendar.DaySelectionModel: Clears any selection from the selection model.
clearSelection() - Method in class org.jdesktop.swingx.calendar.DefaultDateSelectionModel: Clears any selection from the selection model.
clearSelection() - Method in class org.jdesktop.swingx.calendar.SingleDaySelectionModel: Clears any selection from the selection model.
clearSelection() - Method in class org.jdesktop.swingx.JXMonthView: Clear any selection from the selection model
clearSelection() - Method in class org.jdesktop.swingx.JXTreeTable: Overridden to ensure that private renderer state is kept in sync with the state of the component.
clearText(String) - Static method in class pt.uminho.anote2.aibench.curator.utils.ParsingUtils
clearText(String) - Static method in class pt.uminho.anote2.datastructures.textprocessing.ParsingUtils
CLICKED_KEY - Static variable in class org.jdesktop.swingx.rollover.RolloverProducer: Key for client property mapped from mouse-triggered action.
clone() - Method in class org.jdesktop.beans.AbstractBean
clone() - Method in class pt.uminho.anote2.aibench.corpus.utils.ANoteAnnotation
clone() - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteAnnotation
clone() - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentAnnotations
clone() - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentText
clone() - Method in interface pt.uminho.anote2.core.annotation.IAnnotation
clone() - Method in interface pt.uminho.anote2.core.annotation.IEntityAnnotation
clone() - Method in interface pt.uminho.anote2.core.annotation.IEventAnnotation
clone() - Method in interface pt.uminho.anote2.core.report.resources.IResourceUpdateReport
clone() - Method in class pt.uminho.anote2.datastructures.annotation.Annotation
clone() - Method in class pt.uminho.anote2.datastructures.annotation.AnnotationPosition
clone() - Method in class pt.uminho.anote2.datastructures.annotation.AnnotationPositions
clone() - Method in class pt.uminho.anote2.datastructures.annotation.ner.EntityAnnotation
clone() - Method in class pt.uminho.anote2.datastructures.annotation.ner.SimpleEntity
clone() - Method in class pt.uminho.anote2.datastructures.annotation.re.EventAnnotation
clone() - Method in class pt.uminho.anote2.datastructures.report.resources.ResourceUpdateReport
clone() - Method in class pt.uminho.anote2.datastructures.resources.ResourceElement
close() - Method in class pt.uminho.anote2.aibench.utils.operations.TimerJDialog
close() - Method in class pt.uminho.generic.wizard2.Wizard
CLOSE_ACTION_COMMAND - Static variable in class org.jdesktop.swingx.JXDialog
closeConnection() - Method in interface pt.uminho.anote2.core.database.IDatabase: Method that close a database connection
closeConnection() - Method in class pt.uminho.anote2.datastructures.database.ADatabase
closePS() - Method in class pt.uminho.anote2.relation.core.gate.RelationsExtraction
closeView() - Method in class pt.uminho.anote2.aibench.utils.wizard.SimpleDialogView
cluster - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTablesName
ClusterAlgorithmsFields - Class in pt.uminho.anote2.carrot.linkage.datastructures
ClusterAlgorithmsFields() - Constructor for class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsFields
ClusterAlgorithmsPropertiesNames - Class in pt.uminho.anote2.carrot.linkage.datastructures
ClusterAlgorithmsPropertiesNames() - Constructor for class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsPropertiesNames
clusterCount - Static variable in class pt.uminho.anote2.carrot.linkage.datastructures.ClusterAlgorithmsPropertiesNames
ClusteringDataFromDocumentSources - Class in pt.uminho.anote2.carrot.linkage.examples: This example shows how to cluster Documents retrieved from IDocumentSources.
ClusteringDataFromDocumentSources() - Constructor for class pt.uminho.anote2.carrot.linkage.examples.ClusteringDataFromDocumentSources
ClusteringDataFromPubMed - Class in pt.uminho.anote2.carrot.linkage.examples: This example shows how to cluster Documents retrieved from PubMedDocumentSource
ClusteringDataFromPubMed() - Constructor for class pt.uminho.anote2.carrot.linkage.examples.ClusteringDataFromPubMed
ClusteringDocumentList - Class in pt.uminho.anote2.carrot.linkage.examples: This example shows how to cluster a set of documents available as an ArrayList.
ClusteringDocumentList() - Constructor for class pt.uminho.anote2.carrot.linkage.examples.ClusteringDocumentList
ClusteringGUI - Class in pt.uminho.anote2.carrot.linkage.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
ClusteringGUI() - Constructor for class pt.uminho.anote2.carrot.linkage.gui.ClusteringGUI
ClusteringOperationPanel - Class in pt.uminho.anote2.carrot.linkage.gui.help
ClusteringOperationPanel(IClustering, Map<Integer, IPublication>) - Constructor for class pt.uminho.anote2.carrot.linkage.gui.help.ClusteringOperationPanel
ClusteringPane - Class in pt.uminho.anote2.carrot.linkage.gui.help: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
ClusteringPane(ICLusteringReport) - Constructor for class pt.uminho.anote2.carrot.linkage.gui.help.ClusteringPane
ClusteringReport - Class in pt.uminho.anote2.carrot.linkage.report
ClusteringReport(IClustering, CarrotClusterAlgorithmsEnum, QueryInformationRetrieval) - Constructor for class pt.uminho.anote2.carrot.linkage.report.ClusteringReport
ClusteringReportGUI - Class in pt.uminho.anote2.carrot.linkage.gui
ClusteringReportGUI(ICLusteringReport) - Constructor for class pt.uminho.anote2.carrot.linkage.gui.ClusteringReportGUI
clusterLabels - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTablesName
ClusterProcess - Class in pt.uminho.anote2.carrot.linkage.datastructures
ClusterProcess(int, Properties, String, List<ILabelCluster>) - Constructor for class pt.uminho.anote2.carrot.linkage.datastructures.ClusterProcess
clusterProcessLabelsRegistry(int, int, List<Cluster>) - Static method in class pt.uminho.anote2.carrot.linkage.datastructures.CarrotDatabaseLinkage
clusterProcessPropertiesRegistry(int, Properties) - Static method in class pt.uminho.anote2.carrot.linkage.datastructures.CarrotDatabaseLinkage
clusterProcessQueryRegistry(int, int) - Static method in class pt.uminho.anote2.carrot.linkage.datastructures.CarrotDatabaseLinkage
clusterProcessRegistry(String) - Static method in class pt.uminho.anote2.carrot.linkage.datastructures.CarrotDatabaseLinkage
ClusterSelectionTreeTableModel - Class in pt.uminho.anote2.carrot.linkage.gui.help
ClusterSelectionTreeTableModel(TreeTableNode, int, List<String>) - Constructor for class pt.uminho.anote2.carrot.linkage.gui.help.ClusterSelectionTreeTableModel
ClustersQueryView - Class in pt.uminho.anote2.carrot.linkage.views: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
ClustersQueryView(QueryInformationRetrievalExtension) - Constructor for class pt.uminho.anote2.carrot.linkage.views.ClustersQueryView
COLLAPSE_ICON - Static variable in class org.jdesktop.swingx.JXCollapsiblePane: The icon used by the "toggle" action when the JXCollapsiblePane is expanded, i.e the icon which indicates the pane can be collapsed.
collapseAll() - Method in class org.jdesktop.swingx.JXTree: Collapses all nodes in this tree.
collapseAll() - Method in class org.jdesktop.swingx.JXTreeTable: Collapses all nodes in the treetable.
collapsePath(TreePath) - Method in class org.jdesktop.swingx.JXTreeTable: Collapses the node at the specified path in the treetable.
collapseRow(int) - Method in class org.jdesktop.swingx.JXTreeTable: Collapses the row in the treetable.
CollectionAffy - Class in es.uvigo.ei.sing.BioSearch.datatypes
CollectionAffy() - Constructor for class es.uvigo.ei.sing.BioSearch.datatypes.CollectionAffy
CollectionNCBI - Class in es.uvigo.ei.sing.BioSearch.datatypes
CollectionNCBI() - Constructor for class es.uvigo.ei.sing.BioSearch.datatypes.CollectionNCBI
CollectionResult - Class in es.uvigo.ei.sing.BioSearch.datatypes
CollectionResult() - Constructor for class es.uvigo.ei.sing.BioSearch.datatypes.CollectionResult
Color - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
COLOR_CHANGED_PROPERTY - Static variable in class org.jdesktop.swingx.graphics.ShadowRenderer: Identifies a change to the color used to render the shadow.
ColorBurn - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
ColorDodge - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
ColorHighlighter - Class in org.jdesktop.swingx.decorator: A Highlighter to modify component colors.
ColorHighlighter() - Constructor for class org.jdesktop.swingx.decorator.ColorHighlighter: Instantiates a ColorHighlighter with null colors and default HighlightPredicate.
ColorHighlighter(HighlightPredicate) - Constructor for class org.jdesktop.swingx.decorator.ColorHighlighter: Instantiates a ColorHighlighter with null colors and uses the specified HighlightPredicate.
ColorHighlighter(Color, Color) - Constructor for class org.jdesktop.swingx.decorator.ColorHighlighter: Constructs a ColorHighlighter with the specified background and foreground colors and null section colors.
ColorHighlighter(HighlightPredicate, Color, Color) - Constructor for class org.jdesktop.swingx.decorator.ColorHighlighter: Constructs a ColorHighlighter with the specified unselected colors and HighlightPredicate.
ColorHighlighter(Color, Color, Color, Color) - Constructor for class org.jdesktop.swingx.decorator.ColorHighlighter: Constructs a ColorHighlighter with the specified background and foreground colors for unselected and selected cells.
ColorHighlighter(HighlightPredicate, Color, Color, Color, Color) - Constructor for class org.jdesktop.swingx.decorator.ColorHighlighter: Constructs a ColorHighlighter with the specified colors and HighlightPredicate.
ColorTintFilter - Class in org.jdesktop.swingx.image: A color tint filter can be used to mix a solid color to an image.
ColorTintFilter(Color, float) - Constructor for class org.jdesktop.swingx.image.ColorTintFilter: Creates a new color mixer filter.
ColorUtil - Class in org.jdesktop.swingx.color: A collection of utility methods for working with Colors.
ColorUtil() - Constructor for class org.jdesktop.swingx.color.ColorUtil
ColorUtilities - Class in org.jdesktop.swingx.graphics: ColorUtilities contains a set of tools to perform common color operations easily.
column - Variable in class org.jdesktop.swingx.decorator.ComponentAdapter: current column in view coordinates.
COLUMN_CONTROL_BUTTON_ICON_KEY - Static variable in class org.jdesktop.swingx.table.ColumnControlButton: the key for looking up the control's icon in the UIManager.
COLUMN_CONTROL_BUTTON_MARGIN_KEY - Static variable in class org.jdesktop.swingx.table.ColumnControlButton: the key for looking up the control's margin in the UIManager.
COLUMN_CONTROL_MARKER - Static variable in class org.jdesktop.swingx.table.ColumnControlButton: Marker to auto-recognize actions which should be added to the popup.
ColumnControlButton - Class in org.jdesktop.swingx.table: A component to allow interactive customization of JXTable's columns.
ColumnControlButton(JXTable) - Constructor for class org.jdesktop.swingx.table.ColumnControlButton: Creates a column control button for the table.
ColumnControlButton(JXTable, Icon) - Constructor for class org.jdesktop.swingx.table.ColumnControlButton: Creates a column control button for the table.
ColumnControlButton.ColumnVisibilityAction - Class in org.jdesktop.swingx.table: A specialized Action which takes care of keeping in synch with TableColumn state.
ColumnControlButton.ColumnVisibilityAction(TableColumn) - Constructor for class org.jdesktop.swingx.table.ColumnControlButton.ColumnVisibilityAction: Creates a action synched to the table column.
ColumnControlButton.DefaultColumnControlPopup - Class in org.jdesktop.swingx.table: A default implementation of ColumnControlPopup.
ColumnControlButton.DefaultColumnControlPopup() - Constructor for class org.jdesktop.swingx.table.ColumnControlButton.DefaultColumnControlPopup
ColumnControlButtonAddon - Class in org.jdesktop.swingx.plaf: Addon to load LF specific properties for the ColumnControlButton.
ColumnControlButtonAddon() - Constructor for class org.jdesktop.swingx.plaf.ColumnControlButtonAddon: Instantiates the addon for ColumnControlButton.
ColumnControlIcon - Class in org.jdesktop.swingx.icon: Icon class for rendering icon which indicates user control of column visibility.
ColumnControlIcon() - Constructor for class org.jdesktop.swingx.icon.ColumnControlIcon: TODO: need to support small, medium, large
ColumnControlPopup - Interface in org.jdesktop.swingx.table: Encapsulates the popup component which is the delegate for all popup visuals, used by a ColumnControlButton.
ColumnDelemiterDefaultValue - Class in pt.uminho.anote2.datastructures.utils.generic
ColumnDelemiterDefaultValue(Map<String, ColumnParameters>) - Constructor for class pt.uminho.anote2.datastructures.utils.generic.ColumnDelemiterDefaultValue
ColumnFactory - Class in org.jdesktop.swingx.table: Creates and configures TableColumnExts.
ColumnFactory() - Constructor for class org.jdesktop.swingx.table.ColumnFactory
ColumnHeaderRenderer - Class in org.jdesktop.swingx.table: Header renderer class which renders column sort feedback (arrows).
ColumnHeaderRenderer() - Constructor for class org.jdesktop.swingx.table.ColumnHeaderRenderer
ColumnHeaderRenderer(JTableHeader) - Constructor for class org.jdesktop.swingx.table.ColumnHeaderRenderer
ColumnHeaderRendererAddon - Class in org.jdesktop.swingx.plaf: Addon for ColumnHeaderRenderer.
ColumnHeaderRendererAddon() - Constructor for class org.jdesktop.swingx.plaf.ColumnHeaderRendererAddon
columnMarginChanged(ChangeEvent) - Method in class org.jdesktop.swingx.JXTable: Overridden to support enhanced auto-resize behaviour enabled and necessary.
ColumnNames - Class in pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.csv
ColumnNames() - Constructor for class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.csv.ColumnNames
ColumnParameters - Class in pt.uminho.anote2.datastructures.utils.generic
ColumnParameters(int, Delimiter, DefaultDelimiterValue) - Constructor for class pt.uminho.anote2.datastructures.utils.generic.ColumnParameters
ColumnParameters(int, Delimiter, DefaultDelimiterValue, Delimiter) - Constructor for class pt.uminho.anote2.datastructures.utils.generic.ColumnParameters
columnPropertyChange(PropertyChangeEvent) - Method in interface org.jdesktop.swingx.event.TableColumnModelExtListener: Notifies listeners about property changes of contained columns.
columnPropertyChange(PropertyChangeEvent) - Method in class org.jdesktop.swingx.JXTable: Notifies listeners about property changes of contained columns.
columnPropertyChange(PropertyChangeEvent) - Method in class org.jdesktop.swingx.JXTableHeader: Implementing TableColumnModelExt: listening to column property changes.
columnRemoved(TableColumnModelEvent) - Method in class org.jdesktop.swingx.JXTable: overridden to remove the interactive sorter if the sorted column is no longer contained in the ColumnModel.
columnSelectionChanged(ListSelectionEvent) - Method in class org.jdesktop.swingx.JXTable: Overridden to update the enabled state of the pack selected column Action.
ComboBoxAdaptor - Class in org.jdesktop.swingx.autocomplete: An implementation of the AbstractAutoCompleteAdaptor that is suitable for JComboBox.
ComboBoxAdaptor(JComboBox) - Constructor for class org.jdesktop.swingx.autocomplete.ComboBoxAdaptor: Creates a new ComobBoxAdaptor for the given combobox.
ComboBoxCellEditor - Class in org.jdesktop.swingx.autocomplete: This is a cell editor that can be used when a combo box (that has been set up for automatic completion) is to be used in a JTable.
ComboBoxCellEditor(JComboBox) - Constructor for class org.jdesktop.swingx.autocomplete.ComboBoxCellEditor: Creates a new ComboBoxCellEditor.
ComboEntitiesAnnotationsRenderer - Class in pt.uminho.anote2.aibench.corpus.view.help
ComboEntitiesAnnotationsRenderer(Map<Integer, DocumentEntityStatistics>) - Constructor for class pt.uminho.anote2.aibench.corpus.view.help.ComboEntitiesAnnotationsRenderer
ComboRelationAndEntitiesAnnotationsRenderer - Class in pt.uminho.anote2.aibench.corpus.view.help
ComboRelationAndEntitiesAnnotationsRenderer(Map<Integer, DocumentRelationsAndEntitiesStats>) - Constructor for class pt.uminho.anote2.aibench.corpus.view.help.ComboRelationAndEntitiesAnnotationsRenderer
COMMIT_KEY - Static variable in class org.jdesktop.swingx.JXDatePicker: action command used for commit actionEvent.
COMMIT_KEY - Static variable in class org.jdesktop.swingx.JXMonthView: action command used for commit actionEvent.
commitEdit() - Method in class org.jdesktop.swingx.JXDatePicker: Commits the editor's changes and notifies ActionListeners.
commitSelection() - Method in class org.jdesktop.swingx.JXMonthView: Commits the current selection.
compare(Object, Object) - Method in class pt.uminho.anote2.aibench.curator.datastructures.TermComparator
compare(QueryInformationRetrievalExtension) - Method in class pt.uminho.anote2.aibench.publicationmanager.datatypes.PublicationManager
compare(Object, Object) - Method in class pt.uminho.anote2.datastructures.utils.PositionComparator
compare(Object, Object) - Method in class pt.uminho.anote2.datastructures.utils.TermComparator
compareNodes(InterfaceTreeNode<T>) - Method in class pt.uminho.anote2.aibench.resources.datastructures.tree.TreeNodeOntology
compareNodes(InterfaceTreeNode<T>) - Method in interface pt.uminho.anote2.datastructures.utils.tree.InterfaceTreeNode
compareTo(Object) - Method in class org.jdesktop.swingx.hyperlink.LinkModel
compareTo(DictionaryAibench) - Method in class pt.uminho.anote2.aibench.resources.datatypes.DictionaryAibench
compareTo(LexicalWordsAibench) - Method in class pt.uminho.anote2.aibench.resources.datatypes.LexicalWordsAibench
compareTo(AnnotationPosition) - Method in class pt.uminho.anote2.datastructures.annotation.AnnotationPosition
compareTo(IEntityAnnotation) - Method in class pt.uminho.anote2.datastructures.annotation.ner.EntityAnnotation
compareTo(SimpleEntity) - Method in class pt.uminho.anote2.datastructures.annotation.ner.SimpleEntity
compareTo(SimpleEvent) - Method in class pt.uminho.anote2.datastructures.annotation.re.SimpleEvent
compareTo(IEProcess) - Method in class pt.uminho.anote2.datastructures.process.IEProcess
compareTo(IEdge) - Method in class pt.uminho.anote2.datastructures.process.network.Edge
compareTo(ICardinality) - Method in class pt.uminho.anote2.datastructures.process.re.export.configuration.Cardinality
compareTo(IRelationsType) - Method in class pt.uminho.anote2.datastructures.process.re.export.configuration.RelationType
compareTo(IDictionary) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Dictionary
compareTo(ILookupTable) - Method in class pt.uminho.anote2.datastructures.resources.lookuptable.LookupTable
compareTo(IOntology) - Method in class pt.uminho.anote2.datastructures.resources.ontology.Ontology
compareTo(IResourceElement) - Method in class pt.uminho.anote2.datastructures.resources.ResourceElement
compareTo(IRule) - Method in class pt.uminho.anote2.datastructures.resources.rule.RulesSet
compareTo(GenericPairC<A, B>) - Method in class pt.uminho.anote2.datastructures.utils.GenericPairC
compareTo(GenericPairComparable<A, B>) - Method in class pt.uminho.anote2.datastructures.utils.GenericPairComparable
completePLSteps(String) - Method in class pt.uminho.anote2.relation.gate.Gate7PosTagger
completePLSteps(File) - Method in class pt.uminho.anote2.relation.gate.Gate7PosTagger
completePLSteps(File) - Method in class pt.uminho.anote2.relation.gate.LingPipePosTagger
completePLSteps(File) - Method in class pt.uminho.anote2.relation.gate.StanfordPosTagger
completePLSteps(String) - Method in interface pt.uminho.gate.process.IGatePosTagger
completePLSteps(File) - Method in interface pt.uminho.gate.process.IGatePosTagger
complexTagToHtml(String) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentStructure: PAra as partes do texto
ComponentAdapter - Class in org.jdesktop.swingx.decorator: Abstract base class for all component data adapter classes.
ComponentAdapter(JComponent) - Constructor for class org.jdesktop.swingx.decorator.ComponentAdapter: Constructs a ComponentAdapter, setting the specified component as the target component.
ComponentAddon - Interface in org.jdesktop.swingx.plaf: Each new component type of the library will contribute an addon to the LookAndFeelAddons.
ComponentProvider<T extends javax.swing.JComponent> - Class in org.jdesktop.swingx.renderer: Abstract base class of a provider for a cell rendering component.
ComponentProvider() - Constructor for class org.jdesktop.swingx.renderer.ComponentProvider: Instantiates a component provider with LEADING horizontal alignment and default to-String converter.
ComponentProvider(StringValue) - Constructor for class org.jdesktop.swingx.renderer.ComponentProvider: Instantiates a component provider with LEADING horizontal alignment and the given converter.
ComponentProvider(StringValue, int) - Constructor for class org.jdesktop.swingx.renderer.ComponentProvider: Instantiates a LabelProvider with given to-String converter and given horizontal alignment.
componentResized(ComponentEvent) - Method in class org.jdesktop.swingx.util.WindowUtils.MinSizeComponentListener
CompositeAction - Class in org.jdesktop.swingx.action: A class that represents an action which will fire a sequence of actions.
CompositeAction() - Constructor for class org.jdesktop.swingx.action.CompositeAction
CompositeAction(String) - Constructor for class org.jdesktop.swingx.action.CompositeAction
CompositeAction(String, String) - Constructor for class org.jdesktop.swingx.action.CompositeAction
CompositeAction(String, Icon) - Constructor for class org.jdesktop.swingx.action.CompositeAction
CompositeAction(String, String, Icon) - Constructor for class org.jdesktop.swingx.action.CompositeAction
CompoundHighlighter - Class in org.jdesktop.swingx.decorator: A class which manages the lists of Highlighters.
CompoundHighlighter(Highlighter...) - Constructor for class org.jdesktop.swingx.decorator.CompoundHighlighter: Instantiates a CompoundHighlighter containing the given Highlighters.
CompoundHighlighter(HighlightPredicate, Highlighter...) - Constructor for class org.jdesktop.swingx.decorator.CompoundHighlighter: Instantiates a CompoundHighlighter with the given predicate containing the given Highlighters.
CompoundPainter<T> - Class in org.jdesktop.swingx.painter: A Painter implementation composed of an array of Painters.
CompoundPainter() - Constructor for class org.jdesktop.swingx.painter.CompoundPainter: Creates a new instance of CompoundPainter
CompoundPainter(Painter...) - Constructor for class org.jdesktop.swingx.painter.CompoundPainter: Convenience constructor for creating a CompoundPainter for an array of painters.
compounds - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalNames
compute(double) - Method in class org.jdesktop.swingx.JXGraph.Plot: This method must return the result of a mathematical transformation of its sole parameter.
Comun - Class in es.uvigo.ei.pdfDownloader
Comun() - Constructor for class es.uvigo.ei.pdfDownloader.Comun
conditional - Static variable in class pt.uminho.anote2.datastructures.annotation.re.EventPolarity
Configuration - Class in pt.uminho.anote2.datastructures.utils.conf
Configuration() - Constructor for class pt.uminho.anote2.datastructures.utils.conf.Configuration
configurationFile - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
configurationWizardStepFour - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfo
configurationWizardStepOne - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfo
configurationWizardStepThree - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfo
configurationWizardStepTwo - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfo
configureButton(JToggleButton, AbstractActionExt, ButtonGroup) - Method in class org.jdesktop.swingx.action.ActionContainerFactory
configureColumnWidths(JXTable, TableColumnExt) - Method in class org.jdesktop.swingx.table.ColumnFactory: Configures column initial widths properties from JXTable.
configureSelectableButton(AbstractButton, AbstractActionExt, ButtonGroup) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: method to configure a "selectable" button from the given AbstractActionExt.
configureTableColumn(TableModel, TableColumnExt) - Method in class org.jdesktop.swingx.table.ColumnFactory: Configure column properties from TableModel.
configureVisuals(T, CellContext) - Method in class org.jdesktop.swingx.renderer.DefaultVisuals: Configures all default visual state of the rendering component from the given cell context.
ConflitsType - Enum in pt.uminho.anote2.core.report.resources
ConsoleFormatter - Class in pt.uminho.anote2.carrot.linkage.examples: Simple console formatter for dumping ProcessingResult.
ConsoleFormatter() - Constructor for class pt.uminho.anote2.carrot.linkage.examples.ConsoleFormatter
ConsoleFormatter.ClusterDetailsFormatter - Class in pt.uminho.anote2.carrot.linkage.examples
ConsoleFormatter.ClusterDetailsFormatter() - Constructor for class pt.uminho.anote2.carrot.linkage.examples.ConsoleFormatter.ClusterDetailsFormatter
constructTable(TableModel) - Static method in class pt.uminho.anote2.aibench.resources.gui.guiUtils: This method returns a table with the given model.
constructTable(TableModel) - Static method in class pt.uminho.anote2.aibench.utils.gui.guiUtils: This method returns a table with the given model.
constructToolBar() - Method in class pt.uminho.anote2.aibench.curator.view.ANoteDocumentView
constructToolBar() - Method in class pt.uminho.anote2.aibench.curator.view.REANoteDocumentView
contain(AnnotationPosition) - Method in class pt.uminho.anote2.datastructures.annotation.AnnotationPosition
contains(DateSpan) - Method in class org.jdesktop.swingx.calendar.DateSpan: Returns true if this DateSpan contains the specified DateSpan.
contains(long) - Method in class org.jdesktop.swingx.calendar.DateSpan: Returns whether or not this DateSpan contains the specified time.
contains(long, long) - Method in class org.jdesktop.swingx.calendar.DateSpan: Returns whether or not this DateSpan contains the specified date span.
contains(double, double) - Method in class org.jdesktop.swingx.geom.Morphing2D
contains(Point2D) - Method in class org.jdesktop.swingx.geom.Morphing2D
contains(double, double, double, double) - Method in class org.jdesktop.swingx.geom.Morphing2D
contains(Rectangle2D) - Method in class org.jdesktop.swingx.geom.Morphing2D
contains(double, double) - Method in class org.jdesktop.swingx.geom.Star2D
contains(Point2D) - Method in class org.jdesktop.swingx.geom.Star2D
contains(double, double, double, double) - Method in class org.jdesktop.swingx.geom.Star2D
contains(Rectangle2D) - Method in class org.jdesktop.swingx.geom.Star2D
contains(JComponent, int, int) - Method in class org.jdesktop.swingx.plaf.basic.BasicHyperlinkUI: Overridden to return true if the position is inside the union of the text and icon rectangle, false otherwise.
contains(Point2D) - Method in class org.jdesktop.swingx.plaf.ShapeUIResource
contains(Rectangle2D) - Method in class org.jdesktop.swingx.plaf.ShapeUIResource
contains(double, double) - Method in class org.jdesktop.swingx.plaf.ShapeUIResource
contains(double, double, double, double) - Method in class org.jdesktop.swingx.plaf.ShapeUIResource
contains(Object) - Method in class pt.uminho.anote2.datastructures.utils.multithearding.JobQueue
contains(double) - Method in class pt.uminho.generic.components.JSliderDouble: Returns true if the specified value is within the range indicated by this range slider, i˙e˙ lowValue 1 <= v <= highValue.
containsAll(Collection<?>) - Method in class pt.uminho.anote2.datastructures.utils.multithearding.JobQueue
containsKey(Object) - Method in class pt.uminho.anote2.datastructures.annotation.AnnotationPositions
containsKey(K) - Method in class pt.uminho.anote2.datastructures.utils.OrderedMap
containsUserName(String) - Method in class org.jdesktop.swingx.auth.DefaultUserNameStore
containsUserName(String) - Method in class org.jdesktop.swingx.auth.UserNameStore
containsValue(V) - Method in class pt.uminho.anote2.datastructures.utils.OrderedMap
CONTENTS_CHANGED - Static variable in class org.jdesktop.swingx.decorator.PipelineEvent: Identifies one or more changes in the pipeline.
contentsChanged(PipelineEvent) - Method in interface org.jdesktop.swingx.decorator.PipelineListener: Sent when the pipeline has changed in any way.
continueOption - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfoSmall
Contract - Class in org.jdesktop.swingx.util: Utility class for checking contracts.
contribute(ComponentAddon) - Static method in class org.jdesktop.swingx.plaf.LookAndFeelAddons: Each new component added by the library will contribute its default UI classes, colors and fonts to the LookAndFeelAddons.
convert(String, Object) - Method in class pt.uminho.anote2.aibench.ner.settings.NERLexicalResourcesSettingsNode
convert(String, Object) - Method in class pt.uminho.anote2.datastructures.utils.conf.propertiesmanager.AbstractPropertyNode
convert(String, Object) - Method in interface pt.uminho.anote2.datastructures.utils.conf.propertiesmanager.IPropertyNode
convert(String, Object) - Method in class pt.uminho.anote2.relation.settings.RERelationSettingsNode
convert(String, Object) - Method in class pt.uminho.anote2.workflow.settings.basic.WorkflowBasicsSettingsNode
convert(String, Object) - Method in class pt.uminho.anote2.workflow.settings.general.WorkflowGeneralSettingsNode
convert(String, Object) - Method in class pt.uminho.anote2.workflow.settings.query.WorkflowQuerySettingsNode
convertClassesToResourceProperties(Set<Integer>) - Static method in class pt.uminho.anote2.datastructures.resources.ResourcesHelp
convertIndexToModel(int) - Method in class org.jdesktop.swingx.JXList: Convert row index from view coordinates to model coordinates accounting for the presence of sorters and filters.
convertIndexToView(int) - Method in class org.jdesktop.swingx.JXList: Convert index from model coordinates to view coordinates accounting for the presence of sorters and filters.
convertPDFDocument(String) - Method in interface pt.uminho.anote2.core.document.IPDFtoTXT: Method that convert a pdf file in a text file
convertPDFDocument(String) - Method in class pt.uminho.anote2.datastructures.documents.PDFtoText
convertRowIndexToModel(int) - Method in class org.jdesktop.swingx.decorator.Filter: Convert row index from view coordinates to model coordinates accounting for the presence of sorters and filters.
convertRowIndexToModel(int) - Method in class org.jdesktop.swingx.decorator.FilterPipeline: Convert row index from view coordinates to model coordinates accounting for the presence of sorters and filters.
convertRowIndexToModel(int) - Method in class org.jdesktop.swingx.JXTable: Convert row index from view coordinates to model coordinates accounting for the presence of sorters and filters.
convertRowIndexToView(int) - Method in class org.jdesktop.swingx.decorator.Filter: Convert row index from model coordinates to view coordinates accounting for the presence of sorters and filters.
convertRowIndexToView(int) - Method in class org.jdesktop.swingx.decorator.FilterPipeline: Convert row index from model coordinates to view coordinates accounting for the presence of sorters and filters.
convertRowIndexToView(int) - Method in class org.jdesktop.swingx.JXTable: Convert row index from model coordinates to view coordinates accounting for the presence of sorters and filters.
convertSentenceInHTMLFormat() - Method in class pt.uminho.anote2.aibench.corpus.gui.RelationDetailsGUI
convertSpecialChars(String) - Static method in class pt.uminho.anote2.aibench.curator.utils.ParsingUtils
convertString(String) - Static method in enum pt.uminho.anote2.core.document.RelevanceType
convertStringInPosTaggerEnem(String) - Static method in enum pt.uminho.anote2.relation.datastructures.PosTaggerEnem
convertStringToCorpusType(String) - Static method in enum pt.uminho.anote2.core.document.CorpusTextType
convertStringToNERLexicalResourcesPreProssecingEnum(String) - Static method in enum pt.uminho.anote2.aibench.ner.configuration.NERLexicalResourcesPreProssecingEnum
convertStringtoNERPRocess(String) - Static method in enum pt.uminho.anote2.workflow.datastructures.NERWorkflowProcessesAvailableEnum
convertStringToRelationProcess(String) - Static method in enum pt.uminho.anote2.workflow.datastructures.REWorkflowProcessesAvailableEnum
convertStringToRelationsModelEnem(String) - Static method in enum pt.uminho.anote2.relation.datastructures.RelationsModelEnem
convertTimeToString(long) - Static method in class pt.uminho.anote2.datastructures.utils.Utils
convertToBufferedImage(Image) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Converts the specified image into a compatible buffered image.
convertToBufferedImage(Image) - Static method in class org.jdesktop.swingx.util.PaintUtils: Deprecated. Use GraphicsUtilities.convertToBufferedImage(Image) instead
convertToSpecialChars(String) - Static method in class pt.uminho.anote2.aibench.curator.utils.ParsingUtils
Coordinates - Class in pt.uminho.anote2.datastructures.process.network
Coordinates(double, double, double, double) - Constructor for class pt.uminho.anote2.datastructures.process.network.Coordinates
copy(File, File) - Static method in class pt.uminho.anote2.aibench.utils.File.FileHandling: Binary
copy(File, File) - Static method in class pt.uminho.anote2.datastructures.utils.FileHandling: Method that copy a file in Binary
copy(File, File) - Static method in class pt.uminho.anote2.relation.gate.FileHandling: Method that copy a file in Binary
copyFile(File, File) - Static method in class pt.uminho.anote2.aibench.utils.File.FileHandling
copyFile(File, File) - Static method in class pt.uminho.anote2.datastructures.utils.FileHandling: Method that copy a file
copyFile(File, File) - Static method in class pt.uminho.anote2.relation.gate.FileHandling: Method that copy a file
Corpora - Class in pt.uminho.anote2.aibench.corpus.datatypes
Corpora() - Constructor for class pt.uminho.anote2.aibench.corpus.datatypes.Corpora
CorporaAIBenchManagement - Class in pt.uminho.anote2.aibench.corpus.management.aibench
CorporaAIBenchManagement() - Constructor for class pt.uminho.anote2.aibench.corpus.management.aibench.CorporaAIBenchManagement
corporaAnnotatedDocument - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
corporacorpusName - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
CorporaDatabaseManagement - Class in pt.uminho.anote2.aibench.corpus.management.database
CorporaDatabaseManagement() - Constructor for class pt.uminho.anote2.aibench.corpus.management.database.CorporaDatabaseManagement
corporaName - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
corporaProcessName - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
CorporaProperties - Class in pt.uminho.anote2.aibench.corpus.structures
CorporaProperties() - Constructor for class pt.uminho.anote2.aibench.corpus.structures.CorporaProperties
CorporaPropertiesGUI - Class in pt.uminho.anote2.aibench.corpus.structures
CorporaPropertiesGUI() - Constructor for class pt.uminho.anote2.aibench.corpus.structures.CorporaPropertiesGUI
CorporaView - Class in pt.uminho.anote2.aibench.corpus.view: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CorporaView(Corpora) - Constructor for class pt.uminho.anote2.aibench.corpus.view.CorporaView
Corpus - Class in pt.uminho.anote2.aibench.corpus.datatypes
Corpus(int, String, Corpora, Properties) - Constructor for class pt.uminho.anote2.aibench.corpus.datatypes.Corpus
corpus - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTablesName
corpus - Static variable in class pt.uminho.anote2.workflow.defaultconfiguration.workflow.basic.WorkflowBabicDefaultParameters
CORPUS_NAME - Static variable in class pt.uminho.anote2.workflow.settings.basic.WorkflowBasicsDefaulSettings
CORPUS_NAME - Static variable in class pt.uminho.anote2.workflow.settings.general.WorkflowGeneralDefaulSettings
CORPUS_NAME - Static variable in class pt.uminho.anote2.workflow.settings.query.WorkflowQueryDefaulSettings
CORPUS_RETRIEVAL_PDF - Static variable in class pt.uminho.anote2.workflow.settings.basic.WorkflowBasicsDefaulSettings
CORPUS_RETRIEVAL_PDF - Static variable in class pt.uminho.anote2.workflow.settings.general.WorkflowGeneralDefaulSettings
CORPUS_RETRIEVAL_PDF - Static variable in class pt.uminho.anote2.workflow.settings.query.WorkflowQueryDefaulSettings
CORPUS_TYPE - Static variable in class pt.uminho.anote2.workflow.settings.basic.WorkflowBasicsDefaulSettings
CORPUS_TYPE - Static variable in class pt.uminho.anote2.workflow.settings.general.WorkflowGeneralDefaulSettings
CORPUS_TYPE - Static variable in class pt.uminho.anote2.workflow.settings.query.WorkflowQueryDefaulSettings
CorpusCreateConfiguration - Class in pt.uminho.anote2.datastructures.corpora
CorpusCreateConfiguration(String, Set<IPublication>, CorpusTextType, boolean) - Constructor for class pt.uminho.anote2.datastructures.corpora.CorpusCreateConfiguration
CorpusCreatePanel - Class in pt.uminho.anote2.aibench.corpus.gui.help: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CorpusCreatePanel(ICorpusCreateReport) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.help.CorpusCreatePanel
CorpusCreateReport - Class in pt.uminho.anote2.datastructures.report.corpora
CorpusCreateReport(CorpusTextType, String) - Constructor for class pt.uminho.anote2.datastructures.report.corpora.CorpusCreateReport
CorpusCreateReportGUI - Class in pt.uminho.anote2.aibench.corpus.gui
CorpusCreateReportGUI(ICorpusCreateReport) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.CorpusCreateReportGUI
CorpusDocumentsView - Class in pt.uminho.anote2.aibench.corpus.view
CorpusDocumentsView(Corpus) - Constructor for class pt.uminho.anote2.aibench.corpus.view.CorpusDocumentsView
corpusLoadPosition() - Method in interface pt.uminho.anote2.corpusloaders.ICorpusLoader
corpusLoadPosition() - Method in class pt.uminho.anote2.corpusloaders.loaders.AIMEDProteinCorpusLoader
corpusLoadPosition() - Method in class pt.uminho.anote2.corpusloaders.loaders.ANoteCorpusLoader
corpusLoadPosition() - Method in class pt.uminho.anote2.corpusloaders.loaders.GeniaEventCorpusLoader
CorpusPanel - Class in pt.uminho.generic.genericpanel.corpus: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CorpusPanel() - Constructor for class pt.uminho.generic.genericpanel.corpus.CorpusPanel
CorpusPanel(String) - Constructor for class pt.uminho.generic.genericpanel.corpus.CorpusPanel
CorpusProcessesView - Class in pt.uminho.anote2.aibench.corpus.view: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CorpusProcessesView(Corpus) - Constructor for class pt.uminho.anote2.aibench.corpus.view.CorpusProcessesView
corpusSize() - Method in interface pt.uminho.anote2.corpusloaders.ICorpusLoader
corpusSize() - Method in class pt.uminho.anote2.corpusloaders.loaders.AIMEDProteinCorpusLoader
corpusSize() - Method in class pt.uminho.anote2.corpusloaders.loaders.ANoteCorpusLoader
corpusSize() - Method in class pt.uminho.anote2.corpusloaders.loaders.GeniaEventCorpusLoader
corpusSize - Static variable in class pt.uminho.anote2.datastructures.database.queries.corpora.QueriesCorpora
CorpusTextType - Enum in pt.uminho.anote2.core.document
correctAnnotation(String, String, int, int) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentAnnotations
CorrectSelectionDialog - Class in pt.uminho.anote2.aibench.curator.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CorrectSelectionDialog(JFrame, String[]) - Constructor for class pt.uminho.anote2.aibench.curator.gui.CorrectSelectionDialog
count(int) - Method in interface es.uvigo.ei.sing.BioSearch.connection.PubMexProgressHandler
covertoInteger(String) - Static method in class pt.uminho.anote2.datastructures.annotation.re.EventDirectionally
covertoInteger(String) - Static method in class pt.uminho.anote2.datastructures.annotation.re.EventPolarity
covertoString(int) - Static method in class pt.uminho.anote2.datastructures.annotation.re.EventDirectionally
covertoString(int) - Static method in class pt.uminho.anote2.datastructures.annotation.re.EventPolarity
crear_carpeta(File) - Static method in class es.uvigo.ei.pdfDownloader.Comun
CreareQueryFromClusterOperation - Class in pt.uminho.anote2.carrot.linkage.operations
CreareQueryFromClusterOperation() - Constructor for class pt.uminho.anote2.carrot.linkage.operations.CreareQueryFromClusterOperation
create(T[]) - Static method in class org.jdesktop.swingx.JXRadioGroup: Convenience factory method.
createAction(Action) - Method in class org.jdesktop.swingx.plaf.basic.BasicTaskPaneUI
createAction(Action) - Method in class org.jdesktop.swingx.plaf.TaskPaneUI: Called by the component when an action is added to the component through the JXTaskPane.add(Action) method.
createAlternateStriping() - Static method in class org.jdesktop.swingx.decorator.HighlighterFactory: Creates and returns a Highlighter which highlights with alternate background.
createAlternateStriping(int) - Static method in class org.jdesktop.swingx.decorator.HighlighterFactory: Creates and returns a Highlighter which highlights with alternate background. the first Color.WHITE, the second with the color depending on LF.
createAlternateStriping(Color, Color) - Static method in class org.jdesktop.swingx.decorator.HighlighterFactory: Creates and returns a Highlighter which highlights with alternating background, starting with the base.
createAlternateStriping(Color, Color, int) - Static method in class org.jdesktop.swingx.decorator.HighlighterFactory: Creates and returns a Highlighter which highlights with alternating background, starting with the base.
createAndConfigureTableColumn(TableModel, int) - Method in class org.jdesktop.swingx.table.ColumnFactory: Creates and configures a TableColumnExt.
createBoundAction(String, String, String) - Static method in class org.jdesktop.swingx.action.ActionFactory: Factory Methods for creating BoundActions
createBoundAction(String, String, String, boolean) - Static method in class org.jdesktop.swingx.action.ActionFactory
createBoundAction(String, String, String, boolean, String) - Static method in class org.jdesktop.swingx.action.ActionFactory
createButton(Object, JComponent) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Creates, configures and returns an AbstractButton.
createButton(Action, JComponent) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Creates a button based on the attributes of the action.
createButton(Action) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Creates a button based on the attributes of the action.
createCollectionNCBI() - Static method in class es.uvigo.ei.sing.BioSearch.datatypes.CollectionNCBI
createColorModelCompatibleImage(BufferedImage) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Returns a new BufferedImage using the same color model as the image passed as a parameter.
createColumnHeaderRenderer() - Static method in class org.jdesktop.swingx.table.ColumnHeaderRenderer
createCompatibleDestImage(BufferedImage, ColorModel) - Method in class org.jdesktop.swingx.image.AbstractFilter
createCompatibleImage(BufferedImage) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Returns a new compatible image with the same width, height and transparency as the image specified as a parameter.
createCompatibleImage(BufferedImage, int, int) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Returns a new compatible image of the specified width and height, and the same transparency setting as the image specified as a parameter.
createCompatibleImage(int, int) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Returns a new opaque compatible image of the specified width and height.
createCompatibleImage(int, int) - Static method in class org.jdesktop.swingx.util.PaintUtils: Deprecated. (pre-0.9.6) use GraphicsUtilities.createCompatibleImage(int, int)
createCompatibleImage(int, int, int) - Static method in class org.jdesktop.swingx.util.PaintUtils: Deprecated. (pre-0.9.6) use GraphicsUtilities.createCompatibleImage(int, int) or GraphicsUtilities.createCompatibleTranslucentImage(int, int)
createCompatibleTranslucentImage(int, int) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Returns a new translucent compatible image of the specified width and height.
createCompositeAction(String, String, String) - Static method in class org.jdesktop.swingx.action.ActionFactory: Factory Methods for creating CompositeAction
createCompositeAction(String, String, String, boolean) - Static method in class org.jdesktop.swingx.action.ActionFactory
createCompositeAction(String, String, String, boolean, String) - Static method in class org.jdesktop.swingx.action.ActionFactory
CreateConfigurationsFile - Class in pt.uminho.anote2.aibench.utils.operations
CreateConfigurationsFile() - Constructor for class pt.uminho.anote2.aibench.utils.operations.CreateConfigurationsFile
createConnection(IDatabase) - Static method in class pt.uminho.anote2.aibench.utils.operations.CreateConfigurationsFile
createContext(ColorModel, ColorModel, RenderingHints) - Method in class org.jdesktop.swingx.graphics.BlendComposite
createCorpus(String, Properties) - Method in class pt.uminho.anote2.aibench.corpus.datatypes.Corpora
createCorpus - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfo
CreateCorpusByAIMEDProteinCorpus - Class in pt.uminho.anote2.corpusloaders.operations
CreateCorpusByAIMEDProteinCorpus() - Constructor for class pt.uminho.anote2.corpusloaders.operations.CreateCorpusByAIMEDProteinCorpus
CreateCorpusByAnotev1Corpus - Class in pt.uminho.anote2.corpusloaders.operations
CreateCorpusByAnotev1Corpus() - Constructor for class pt.uminho.anote2.corpusloaders.operations.CreateCorpusByAnotev1Corpus
CreateCorpusByGeniaEventCorpus - Class in pt.uminho.anote2.corpusloaders.operations
CreateCorpusByGeniaEventCorpus() - Constructor for class pt.uminho.anote2.corpusloaders.operations.CreateCorpusByGeniaEventCorpus
CreateCorpusOperationByPublicationManager - Class in pt.uminho.anote2.aibench.corpus.operations
CreateCorpusOperationByPublicationManager() - Constructor for class pt.uminho.anote2.aibench.corpus.operations.CreateCorpusOperationByPublicationManager
CreateCorpusWizard1 - Class in pt.uminho.anote2.aibench.corpus.gui
CreateCorpusWizard1() - Constructor for class pt.uminho.anote2.aibench.corpus.gui.CreateCorpusWizard1
CreateCorpusWizard2 - Class in pt.uminho.anote2.aibench.corpus.gui
CreateCorpusWizard2(List<Object>) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.CreateCorpusWizard2
CreateCorpusWizard3 - Class in pt.uminho.anote2.aibench.corpus.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateCorpusWizard3(List<Object>) - Constructor for class pt.uminho.anote2.aibench.corpus.gui.CreateCorpusWizard3
createCorups() - Method in interface pt.uminho.anote2.core.document.ICreateCorpus
createDataBase(String) - Method in interface pt.uminho.anote2.core.database.IDatabase: Create a Database
createDataBase(String) - Method in class pt.uminho.anote2.datastructures.database.ADatabase
createDefaultColumnsFromModel() - Method in class org.jdesktop.swingx.JXTable: Creates, configures and adds default TableColumns for columns in this table's TableModel.
createDialog(Component, JXErrorPane) - Static method in class org.jdesktop.swingx.JXErrorPane: Constructs and returns an error dialog, using the given JXErrorPane for the view portion of the dialog.
createDialog(Component, JXTipOfTheDay.ShowOnStartupChoice) - Method in class org.jdesktop.swingx.plaf.basic.BasicTipOfTheDayUI
createDialog(Component, JXTipOfTheDay.ShowOnStartupChoice) - Method in class org.jdesktop.swingx.plaf.TipOfTheDayUI: Creates a new JDialog to display a JXTipOfTheDay panel.
createDialog(Component, JXTipOfTheDay.ShowOnStartupChoice) - Method in class org.jdesktop.swingx.plaf.windows.WindowsTipOfTheDayUI
CreateDictionary - Class in pt.uminho.anote2.aibench.resources.operations.dics
CreateDictionary() - Constructor for class pt.uminho.anote2.aibench.resources.operations.dics.CreateDictionary
CreateDictionaryWizard1 - Class in pt.uminho.anote2.aibench.resources.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateDictionaryWizard1() - Constructor for class pt.uminho.anote2.aibench.resources.gui.CreateDictionaryWizard1
CreateDictionaryWizard2 - Class in pt.uminho.anote2.aibench.resources.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateDictionaryWizard2(List<Object>) - Constructor for class pt.uminho.anote2.aibench.resources.gui.CreateDictionaryWizard2
CreateDictionaryWizard3 - Class in pt.uminho.anote2.aibench.resources.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateDictionaryWizard3(Dictionaries, String, String) - Constructor for class pt.uminho.anote2.aibench.resources.gui.CreateDictionaryWizard3
createDirectory(String) - Static method in class pt.uminho.anote2.aibench.utils.File.FileHandling
createDirectory(String) - Static method in class pt.uminho.anote2.datastructures.utils.FileHandling
createDirectory(String) - Static method in class pt.uminho.anote2.relation.gate.FileHandling
createDocumentForStringContent(String) - Method in class pt.uminho.anote2.relation.gate.Gate7PosTagger: Method that create a Document gate based in String sentences
createFindBar() - Method in class org.jdesktop.swingx.search.SearchFactory: Factory method to create a JXFindBar.
createFindPanel() - Method in class org.jdesktop.swingx.search.SearchFactory: Factory method to create a JXFindPanel.
createFrame(Component, JXErrorPane) - Static method in class org.jdesktop.swingx.JXErrorPane: Constructs and returns an error frame, using the given JXErrorPane for the view portion of the frame.
createGateDocument(File) - Static method in class pt.uminho.anote2.corpusloaders.utils.GateLoader
createGateDocument(File) - Method in class pt.uminho.anote2.relation.gate.Gate7PosTagger
createGateDocument(File) - Method in interface pt.uminho.gate.process.IGatePosTagger
createGrid(int, int) - Static method in class pt.uminho.anote2.aibench.resources.gui.guiUtils: Creates a GridBag with the given number of rows and columns
createGrid(int, int) - Static method in class pt.uminho.anote2.aibench.utils.gui.guiUtils: Creates a GridBag with the given number of rows and columns
createInternalFrame(Component, JXErrorPane) - Static method in class org.jdesktop.swingx.JXErrorPane: Constructs and returns an error frame, using the given JXErrorPane for the view portion of the frame.
CreateLexicalWords - Class in pt.uminho.anote2.aibench.resources.operations.lexicalwords
CreateLexicalWords() - Constructor for class pt.uminho.anote2.aibench.resources.operations.lexicalwords.CreateLexicalWords
CreateLexicalWordsGUI - Class in pt.uminho.anote2.aibench.resources.gui
CreateLexicalWordsGUI() - Constructor for class pt.uminho.anote2.aibench.resources.gui.CreateLexicalWordsGUI
CreateLookuptable - Class in pt.uminho.anote2.aibench.curator.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateLookuptable(NERDocumentAnnotation) - Constructor for class pt.uminho.anote2.aibench.curator.gui.CreateLookuptable
CreateLookupTable - Class in pt.uminho.anote2.aibench.resources.operations.lookuptables
CreateLookupTable() - Constructor for class pt.uminho.anote2.aibench.resources.operations.lookuptables.CreateLookupTable
CreateLookupTableGUI - Class in pt.uminho.anote2.aibench.resources.gui
CreateLookupTableGUI() - Constructor for class pt.uminho.anote2.aibench.resources.gui.CreateLookupTableGUI
CreateManualCurationProcessGUI - Class in pt.uminho.anote2.aibench.curator.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateManualCurationProcessGUI() - Constructor for class pt.uminho.anote2.aibench.curator.gui.CreateManualCurationProcessGUI
createMenu(Object[]) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Creates and returns a menu from a List which represents actions, separators and sub-menus.
createMenu(List) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Creates and returns a menu from a List which represents actions, separators and sub-menus.
createMenuBar(Object[]) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Constructs a menu tree from a list of actions or lists of lists or actions.
createMenuBar(List) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Constructs a menu tree from a list of actions or lists of lists or actions.
createMenuItem(Action, JComponent) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Creates a menu item based on the attributes of the action element.
createMenuItem(Action) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Creates a menu item based on the attributes of the action.
CreateOntology - Class in pt.uminho.anote2.aibench.resources.operations.ontologies
CreateOntology() - Constructor for class pt.uminho.anote2.aibench.resources.operations.ontologies.CreateOntology
CreateOntologyGUI - Class in pt.uminho.anote2.aibench.resources.gui
CreateOntologyGUI() - Constructor for class pt.uminho.anote2.aibench.resources.gui.CreateOntologyGUI
createPopup(Object[]) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Constructs a popup menu from an array of action ids.
createPopup(List) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Constructs a popup menu from a list of action ids.
createPosition(int) - Method in class org.jdesktop.swingx.autocomplete.AutoCompleteDocument
createQuery(QueryInformationRetrieval, IClustering, List<ILabelCluster>) - Static method in class pt.uminho.anote2.carrot.linkage.datastructures.CarrotDatabaseLinkage
CreateQueryFromClusterLabels - Class in pt.uminho.anote2.carrot.linkage.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateQueryFromClusterLabels(QueryInformationRetrievalExtension, IClustering, Map<Integer, IPublication>) - Constructor for class pt.uminho.anote2.carrot.linkage.gui.CreateQueryFromClusterLabels
createReflection(BufferedImage) - Method in class org.jdesktop.swingx.graphics.ReflectionRenderer: Returns the reflection of the source image.
createRegEx(String) - Method in class org.jdesktop.swingx.search.PatternModel.AnchoredSearchMode
createRegEx(String) - Method in class org.jdesktop.swingx.search.PatternModel.RegexCreator
CreateResourceGUI - Class in pt.uminho.anote2.aibench.resources.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateResourceGUI() - Constructor for class pt.uminho.anote2.aibench.resources.gui.CreateResourceGUI
CreateRuleGUI - Class in pt.uminho.anote2.aibench.resources.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateRuleGUI() - Constructor for class pt.uminho.anote2.aibench.resources.gui.CreateRuleGUI
CreateRulesSet - Class in pt.uminho.anote2.aibench.resources.operations.rules
CreateRulesSet() - Constructor for class pt.uminho.anote2.aibench.resources.operations.rules.CreateRulesSet
CreateRulesSetGUI - Class in pt.uminho.anote2.aibench.resources.gui: This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
CreateRulesSetGUI() - Constructor for class pt.uminho.anote2.aibench.resources.gui.CreateRulesSetGUI
createServerAction(String, String, String) - Static method in class org.jdesktop.swingx.action.ActionFactory
createShadow(BufferedImage) - Method in class org.jdesktop.swingx.graphics.ShadowRenderer: Generates the shadow for a given picture and the current properties of the renderer.
createSimpleStriping() - Static method in class org.jdesktop.swingx.decorator.HighlighterFactory: Creates and returns a Highlighter which highlights every second row background with a color depending on the LookAndFeel.
createSimpleStriping(int) - Static method in class org.jdesktop.swingx.decorator.HighlighterFactory: Creates and returns a Highlighter which highlights every second row group background with a color depending on LF.
createSimpleStriping(Color) - Static method in class org.jdesktop.swingx.decorator.HighlighterFactory: Creates and returns a Highlighter which highlights every second row background with the given color.
createSimpleStriping(Color, int) - Static method in class org.jdesktop.swingx.decorator.HighlighterFactory: Creates and returns a Highlighter which highlights every second row group background with the given color.
createTableColumn(int) - Method in class org.jdesktop.swingx.table.ColumnFactory: Creates a table column with modelIndex.
createTargetableAction(String, String) - Static method in class org.jdesktop.swingx.action.ActionFactory: These methods are usefull for creating targetable actions
createTargetableAction(String, String, String) - Static method in class org.jdesktop.swingx.action.ActionFactory
createTargetableAction(String, String, String, boolean) - Static method in class org.jdesktop.swingx.action.ActionFactory
createTargetableAction(String, String, String, boolean, String) - Static method in class org.jdesktop.swingx.action.ActionFactory
createThumbnail(BufferedImage, int) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Returns a thumbnail of a source image.
createThumbnail(BufferedImage, int, int) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Returns a thumbnail of a source image.
createThumbnailFast(BufferedImage, int) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Returns a thumbnail of a source image.
createThumbnailFast(BufferedImage, int, int) - Static method in class org.jdesktop.swingx.graphics.GraphicsUtilities: Returns a thumbnail of a source image.
createToolBar(Object[]) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Constructs a toolbar from an action-list id.
createToolBar(List) - Method in class org.jdesktop.swingx.action.ActionContainerFactory: Constructs a toolbar from an action-list id.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicBusyLabelUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicDatePickerUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicErrorPaneUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicHeaderUI: Returns an instance of the UI delegate for the specified component.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicHyperlinkUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicLoginPaneUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicMonthViewUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicMultiThumbSliderUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicStatusBarUI: Returns an instance of the UI delegate for the specified component.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicTaskPaneContainerUI: Returns a new instance of BasicTaskPaneContainerUI.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicTaskPaneUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicTipOfTheDayUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.basic.BasicTitledPanelUI: Returns an instance of the UI delegate for the specified component.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.macosx.MacOSXErrorPaneUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.macosx.MacOSXStatusBarUI: Returns an instance of the UI delegate for the specified component.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.metal.MetalStatusBarUI: Returns an instance of the UI delegate for the specified component.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.metal.MetalTaskPaneUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.misc.GlossyTaskPaneUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.windows.WindowsClassicStatusBarUI: Returns an instance of the UI delegate for the specified component.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.windows.WindowsClassicTaskPaneUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.windows.WindowsHyperlinkUI: Deprecated.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.windows.WindowsStatusBarUI: Returns an instance of the UI delegate for the specified component.
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.windows.WindowsTaskPaneUI
createUI(JComponent) - Static method in class org.jdesktop.swingx.plaf.windows.WindowsTipOfTheDayUI
createView(JXLabel) - Static method in class org.jdesktop.swingx.JXLabel.MultiLineSupport
creoleRegister(String) - Method in class pt.uminho.gate.GateInit
CSVConfiguration - Class in pt.uminho.anote2.datastructures.process.io.export
CSVConfiguration(Delimiter, TextDelimiter, DefaultDelimiterValue) - Constructor for class pt.uminho.anote2.datastructures.process.io.export.CSVConfiguration
CsvFileChooser - Class in pt.uminho.generic.genericpanel.tablesearcher.searchPanel
CsvFileChooser() - Constructor for class pt.uminho.generic.genericpanel.tablesearcher.searchPanel.CsvFileChooser
CSVFileConfigurations - Class in pt.uminho.anote2.datastructures.utils.generic
CSVFileConfigurations(Delimiter) - Constructor for class pt.uminho.anote2.datastructures.utils.generic.CSVFileConfigurations
CSVFileConfigurations(Delimiter, TextDelimiter) - Constructor for class pt.uminho.anote2.datastructures.utils.generic.CSVFileConfigurations
CSVFileConfigurations(Delimiter, TextDelimiter, ColumnDelemiterDefaultValue) - Constructor for class pt.uminho.anote2.datastructures.utils.generic.CSVFileConfigurations
CSVFileConfigurations(Delimiter, ColumnDelemiterDefaultValue) - Constructor for class pt.uminho.anote2.datastructures.utils.generic.CSVFileConfigurations
curatorExternalLinksValue - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
CuratorTermTreeCellRenderer - Class in pt.uminho.anote2.aibench.curator.utils
CuratorTermTreeCellRenderer() - Constructor for class pt.uminho.anote2.aibench.curator.utils.CuratorTermTreeCellRenderer
current() - Static method in class org.jdesktop.swingx.util.JVM
CURRENT_TIP_CHANGED_KEY - Static variable in class org.jdesktop.swingx.JXTipOfTheDay: Used when generating PropertyChangeEvents for the "currentTip" property
currentTime() - Static method in class pt.uminho.anote2.datastructures.utils.Utils: Returns the current time of the system
currentYear() - Static method in class pt.uminho.anote2.datastructures.utils.Utils: Returns the current time of the system

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