A B C D E F G H I J K L M N O P Q R S T U V W X Z

F

FastBlurFilter - Class in org.jdesktop.swingx.image
A fast blur filter can be used to blur pictures quickly.
FastBlurFilter() - Constructor for class org.jdesktop.swingx.image.FastBlurFilter
Creates a new blur filter with a default radius of 3.
FastBlurFilter(int) - Constructor for class org.jdesktop.swingx.image.FastBlurFilter
Creates a new blur filter with the specified radius.
FATAL - Static variable in class org.jdesktop.swingx.error.ErrorLevel
FATAL is a message level indicating a catastrophic failure that should result in the immediate termination of the application.
FATAL_ACTION_KEY - Static variable in class org.jdesktop.swingx.JXErrorPane
Name of the Action used for fatal errors
file(File) - Method in class pt.uminho.anote2.aibench.loadsave.operations.SaveOperation
 
file(File) - Method in class pt.uminho.anote2.aibench.utils.operations.ExitOperation
 
file(File) - Method in class pt.uminho.anote2.aibench.utils.operations.SaveOperation
 
FILE_ICON - Static variable in class org.jdesktop.swingx.renderer.IconValues
An IconValue that presents the current L&F icon for a given file.
FILE_NAME - Static variable in class org.jdesktop.swingx.renderer.StringValues
A StringValue that presents the current L&F display name for a given file.
FILE_TYPE - Static variable in class org.jdesktop.swingx.renderer.StringValues
A StringValue that presents the current L&F type name for a given file.
FileChooserAibench - Class in pt.uminho.generic.genericpanel.filechooser
 
FileChooserAibench(boolean) - Constructor for class pt.uminho.generic.genericpanel.filechooser.FileChooserAibench
 
FileChooserAibench() - Constructor for class pt.uminho.generic.genericpanel.filechooser.FileChooserAibench
 
FileChooserCSVExtention - Class in pt.uminho.generic.components.jchooser
 
FileChooserCSVExtention() - Constructor for class pt.uminho.generic.components.jchooser.FileChooserCSVExtention
 
FileChooserExtension - Class in pt.uminho.anote2.aibench.utils.File
 
FileChooserExtension(boolean) - Constructor for class pt.uminho.anote2.aibench.utils.File.FileChooserExtension
 
FileChooserExtension(boolean, File) - Constructor for class pt.uminho.anote2.aibench.utils.File.FileChooserExtension
 
FileChooserExtensionPdf - Class in pt.uminho.anote2.aibench.publicationmanager.gui
 
FileChooserExtensionPdf() - Constructor for class pt.uminho.anote2.aibench.publicationmanager.gui.FileChooserExtensionPdf
 
FileChooserLoadExtention - Class in pt.uminho.generic.components.jchooser
 
FileChooserLoadExtention(Set<String>) - Constructor for class pt.uminho.generic.components.jchooser.FileChooserLoadExtention
 
FileChooserOBOExtention - Class in pt.uminho.generic.components.jchooser
 
FileChooserOBOExtention() - Constructor for class pt.uminho.generic.components.jchooser.FileChooserOBOExtention
 
fileContains(File, String) - Static method in class pt.uminho.anote2.aibench.utils.File.FileHandling
 
FileFilterCSVExtention - Class in pt.uminho.generic.components.jchooser
 
FileFilterCSVExtention(Set<String>) - Constructor for class pt.uminho.generic.components.jchooser.FileFilterCSVExtention
 
FileHandling - Class in pt.uminho.anote2.aibench.utils.File
 
FileHandling() - Constructor for class pt.uminho.anote2.aibench.utils.File.FileHandling
 
FileHandling - Class in pt.uminho.anote2.datastructures.utils
This class contain method for manager directory and files
FileHandling() - Constructor for class pt.uminho.anote2.datastructures.utils.FileHandling
 
FileHandling - Class in pt.uminho.anote2.relation.gate
This class contain method for manager directory and files
FileHandling() - Constructor for class pt.uminho.anote2.relation.gate.FileHandling
 
fileIsNotDirectory - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfoSmall
 
fileNotcompatible - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalTextInfoSmall
 
FileSystemModel - Class in org.jdesktop.swingx.treetable
A tree table model to simulate a file system.
FileSystemModel() - Constructor for class org.jdesktop.swingx.treetable.FileSystemModel
Creates a file system model using the root directory as the model root.
FileSystemModel(File) - Constructor for class org.jdesktop.swingx.treetable.FileSystemModel
Creates a file system model using the specified root.
fileToString(File) - Static method in class pt.uminho.anote2.datastructures.utils.FileHandling
 
Filter - Class in org.jdesktop.swingx.decorator
A Filter is used to filter the data presented in a data-aware component such as a JXList or a JXTable.
Filter() - Constructor for class org.jdesktop.swingx.decorator.Filter
Constructs a new filter for the first column of a data model.
Filter(int) - Constructor for class org.jdesktop.swingx.decorator.Filter
Constructs a new filter for the specified column of a data model in absolute model coordinates.
filter(BufferedImage, BufferedImage) - Method in class org.jdesktop.swingx.image.AbstractFilter
 
filter(BufferedImage, BufferedImage) - Method in class org.jdesktop.swingx.image.ColorTintFilter
filter(BufferedImage, BufferedImage) - Method in class org.jdesktop.swingx.image.FastBlurFilter
filter(BufferedImage, BufferedImage) - Method in class org.jdesktop.swingx.image.GaussianBlurFilter
filter(BufferedImage, BufferedImage) - Method in class org.jdesktop.swingx.image.StackBlurFilter
FilterClassesGUI - Class in pt.uminho.anote2.aibench.curator.gui
This code was edited or generated using CloudGarden's Jigloo SWT/Swing GUI Builder, which is free for non-commercial use.
FilterClassesGUI(Map<String, AnnotationColorStyleProperty>, Point) - Constructor for class pt.uminho.anote2.aibench.curator.gui.FilterClassesGUI
 
FilterPipeline - Class in org.jdesktop.swingx.decorator
A FilterPipeline is used to define the set of filters for a data-aware component such as a JXList or a JXTable.
FilterPipeline() - Constructor for class org.jdesktop.swingx.decorator.FilterPipeline
Creates an empty open pipeline.
FilterPipeline(Filter...) - Constructor for class org.jdesktop.swingx.decorator.FilterPipeline
Constructs a new FilterPipeline populated with the specified filters that are applied in the order they appear in the list.
FilterPipeline.IdentityFilter - Class in org.jdesktop.swingx.decorator
 
FilterPipeline.IdentityFilter() - Constructor for class org.jdesktop.swingx.decorator.FilterPipeline.IdentityFilter
 
FilterRowPanel - Class in pt.uminho.generic.genericpanel.tablesearcher
 
FilterRowPanel() - Constructor for class pt.uminho.generic.genericpanel.tablesearcher.FilterRowPanel
 
filterTags(String, List<String>) - Method in class pt.uminho.anote2.aibench.curator.datastructures.ANoteDocumentAnnotations
 
FIND_NEXT_ACTION_COMMAND - Static variable in class org.jdesktop.swingx.JXFindPanel
 
FIND_PREVIOUS_ACTION_COMMAND - Static variable in class org.jdesktop.swingx.JXFindPanel
 
findCorpus() - Method in class pt.uminho.anote2.aibench.corpus.datatypes.Corpora
 
findDictionaryTerm - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.ner.lexicalresources.QueriesNERHandRules
 
findDictionaryTermCaseSensitive - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.ner.lexicalresources.QueriesNERHandRules
 
findDictionaryTermSynonym - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.ner.lexicalresources.QueriesNERHandRules
 
findDictionaryTermSynonymCaseSensitive - Static variable in class pt.uminho.anote2.datastructures.database.queries.process.ner.lexicalresources.QueriesNERHandRules
 
findFullTextArticle() - Method in class pt.uminho.anote2.datastructures.documents.Publication
 
findJDialog(Component) - Static method in class org.jdesktop.swingx.util.WindowUtils
Deprecated. (pre-0.9.6) use SwingXUtilities#getAncestor(Class, Component).
findJFrame(Component) - Static method in class org.jdesktop.swingx.util.WindowUtils
Deprecated. (pre-0.9.6) use SwingXUtilities#getAncestor(Class, Component).
findMAxPriorety - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.rules.QueriesRules
 
findNext() - Method in class org.jdesktop.swingx.JXFindPanel
Action callback for FindNext action.
findPartialMathingInDictionaries - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
findPartialMathingInDictionariesCaseAndNoWholeWord - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
findPartialMathingInDictionariesNoMatchCaseAndNoWholeWord - Static variable in class pt.uminho.anote2.datastructures.database.queries.resources.QueriesResources
 
findPrevious() - Method in class org.jdesktop.swingx.JXFindPanel
Action callback for FindPrevious action.
findRelations(IRERelationConfiguration) - Method in class pt.uminho.anote2.relation.operations.OperationRelationExtraction
 
findRootPaneContainer(Component) - Static method in class org.jdesktop.swingx.util.WindowUtils
Deprecated. (pre-0.9.6) use SwingXUtilities#getAncestor(Class, Component).
findSyn(String, Set<String>) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.brenda.Brenda
 
findSyn(Set<String>, BufferedReader) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.Kegg
 
findSyn(String, Set<String>) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.UniProt
 
findTerm(String) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.brenda.Brenda
 
findTErmAndSyn(String, String, Set<String>) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.UniProt
 
findTop30Clues() - Method in class pt.uminho.anote2.aibench.corpus.view.RESchemaRelationsResumeStats
 
findUpdates() - Method in class pt.uminho.anote2.aibench.utils.operations.Anote2CheckForUpdates
 
findWiki() - Method in class pt.uminho.anote2.aibench.utils.operations.Anote2WikiOperation
 
findWindow(Component) - Static method in class org.jdesktop.swingx.util.WindowUtils
 
finish() - Method in class pt.uminho.anote2.aibench.loadsave.gui.SaveGUI
 
finish() - Method in class pt.uminho.anote2.aibench.publicationmanager.gui.UpdateGUI
 
finish() - Method in class pt.uminho.anote2.aibench.resources.gui.CreateRuleGUI
 
finish() - Method in class pt.uminho.anote2.aibench.resources.gui.EditRuleGUI
 
finish() - Method in class pt.uminho.anote2.aibench.resources.gui.LoadDicContentsGUI
 
finish() - Method in class pt.uminho.anote2.aibench.utils.conf.propertiesmanager.PropertiesEditorGUI
 
finish() - Method in class pt.uminho.anote2.aibench.utils.firstrun.StartWizart1
 
finish() - Method in class pt.uminho.anote2.aibench.utils.firstrun.StartWizart2
 
finish() - Method in class pt.uminho.anote2.aibench.utils.firstrun.StartWizart3
 
finish() - Method in class pt.uminho.anote2.aibench.utils.firstrun.StartWizart4
 
finish() - Method in class pt.uminho.anote2.aibench.utils.gui.DialogGenericView
 
finish() - Method in class pt.uminho.anote2.aibench.utils.gui.DialogGenericViewOkButtonOnly
 
finish() - Method in class pt.uminho.anote2.aibench.utils.gui.SaveGUI
 
finish() - Method in class pt.uminho.anote2.aibench.utils.wizard.SimpleDialogView
 
FINISH_BUTTON_ACTION_COMMAND - Static variable in class pt.uminho.generic.wizard2.DefinitionsWizard
 
FINISH_BUTTON_TEXT - Static variable in class pt.uminho.generic.wizard2.DefinitionsWizard
 
finished(File) - Method in interface es.uvigo.ei.pdfDownloader.PDFDownloadHandler
 
finished(CollectionNCBI) - Method in interface es.uvigo.ei.sing.BioSearch.connection.PubMexProgressHandler
 
finTerm(String) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.Kegg
 
finTerm(String, Set<String>) - Method in class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.kegg.KeggGenes
 
fireChildAdded(TreePath, int, Object) - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Notifies registered TreeModelListeners that the child has been added to the the node identified by the given parent path at the given position.
fireChildChanged(TreePath, int, Object) - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Notifies registered TreeModelListeners that the given child of the node identified by the given parent path has been modified.
fireChildRemoved(TreePath, int, Object) - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Notifies registered TreeModelListeners that the child has been removed from the node identified by the given parent path from the given position.
fireChildrenAdded(TreePath, int[], Object[]) - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Notifies registered TreeModelListeners that the given children have been added to the the node identified by the given parent path at the given locations.
fireChildrenChanged(TreePath, int[], Object[]) - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Notifies registered TreeModelListeners that the given children of the node identified by the given parent path have been modified.
fireChildrenRemoved(TreePath, int[], Object[]) - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Notifies registered TreeModelListeners that the given children have been removed to the the node identified by the given parent path from the given locations.
fireErrorEvent(Throwable) - Method in class org.jdesktop.swingx.error.ErrorSupport
Report that an error has occured
fireNewRoot() - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Notifies registered TreeModelListeners that the tree's root has been replaced.
firePathChanged(TreePath) - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Notifies registered TreeModelListeners that the the node identified by the given path has been modified.
firePathLeafStateChanged(TreePath) - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Call when a node has changed its leaf state.
firePropertyChange(String, boolean, boolean) - Method in class org.jdesktop.swingx.renderer.JRendererCheckBox
Overridden for performance reasons.
firePropertyChange(String, boolean, boolean) - Method in class org.jdesktop.swingx.renderer.JRendererLabel
Overridden for performance reasons.
firePropertyChange(String, boolean, boolean) - Method in class org.jdesktop.swingx.renderer.JXRendererHyperlink
Overridden for performance reasons.
fireTreeStructureChanged(TreePath) - Method in class org.jdesktop.swingx.tree.TreeModelSupport
Notifies registered TreeModelListeners that the structure below the node identified by the given path has been completely changed.
firstTextWords() - Method in class pt.uminho.anote2.aibench.curator.documentstructuring.PieceToSearch
 
firstTextWords() - Method in class pt.uminho.anote2.datastructures.textprocessing.documentStructure.PieceToSearch
 
FLAGGED_DATES - Static variable in class org.jdesktop.swingx.JXMonthView
 
FLORAL_WHITE - Static variable in class org.jdesktop.swingx.decorator.HighlighterFactory
 
flush() - Method in class org.jdesktop.swingx.decorator.FilterPipeline
Flushes the pipeline by initiating a refresh on the first filter, if any, in this pipeline.
FOCUS_NEXT_COMPONENT - Static variable in class org.jdesktop.swingx.JXTable
 
FOCUS_PREVIOUS_COMPONENT - Static variable in class org.jdesktop.swingx.JXTable
 
FONT_END - Static variable in class pt.uminho.anote2.aibench.curator.utils.ParsingUtils
 
FONT_END - Static variable in class pt.uminho.anote2.datastructures.textprocessing.ParsingUtils
 
FONT_START - Static variable in class pt.uminho.anote2.aibench.curator.utils.ParsingUtils
 
FONT_START - Static variable in class pt.uminho.anote2.datastructures.textprocessing.ParsingUtils
 
forceShowOnStartup(Preferences) - Static method in class org.jdesktop.swingx.JXTipOfTheDay
Removes the value set for "ShowTipOnStartup" in the given Preferences to ensure the dialog shown by a later call to JXTipOfTheDay.showDialog(Component, Preferences) will be visible to the user.
formatClusterDetails(Cluster) - Method in class pt.uminho.anote2.carrot.linkage.examples.ConsoleFormatter.ClusterDetailsFormatter
 
formatDate(String) - Static method in class pt.uminho.anote2.datastructures.utils.Utils
 
FormatStringValue - Class in org.jdesktop.swingx.renderer
Base type for Format-backed StringValue.
FormatStringValue() - Constructor for class org.jdesktop.swingx.renderer.FormatStringValue
Instantiates a formatted converter with null format.
FormatStringValue(Format) - Constructor for class org.jdesktop.swingx.renderer.FormatStringValue
Instantiates a formatted converter with the given Format.
ForwardingRepaintManager - Class in org.jdesktop.swingx
A RepaintManager that is designed to forward all calls to a contained delegate.
ForwardingRepaintManager(RepaintManager) - Constructor for class org.jdesktop.swingx.ForwardingRepaintManager
Creates a new forwarding manager that forwards all calls to the delegate.
freeFullTextOnly - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalOptions
 
freeMemory() - Method in class pt.uminho.anote2.aibench.corpus.datatypes.Corpus
 
freeMemory() - Method in class pt.uminho.anote2.aibench.corpus.datatypes.NERDocumentAnnotation
 
freeMemory() - Method in class pt.uminho.anote2.aibench.corpus.datatypes.NERSchema
 
freeMemory() - Method in class pt.uminho.anote2.aibench.corpus.datatypes.REDocumentAnnotation
 
freeMemory() - Method in class pt.uminho.anote2.aibench.corpus.stats.NerStatitics
 
Freeze - Static variable in class org.jdesktop.swingx.graphics.BlendComposite
 
fullText - Static variable in class pt.uminho.anote2.datastructures.utils.conf.GlobalNames
Corpus Properties

A B C D E F G H I J K L M N O P Q R S T U V W X Z