pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc
Class BioCycCompound

java.lang.Object
  pt.uminho.anote2.datastructures.report.resources.PortResourceUpdateReport
      pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.DictionaryLoaderHelp
          pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCyc
              pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCycCompound

All Implemented Interfaces:

IDicionaryFlatFilesLoader, IDictionaryLoader

Direct Known Subclasses:

BioCycCoumpoundExtension

public class BioCycCompound
extends BioCyc
implements IDicionaryFlatFilesLoader

Constructor Summary

BioCycCompound(IDictionary dictionary)

Method Summary

boolean	checkFile(java.io.File file)
IResourceUpdateReport	loadTermsFromFile(java.io.File file, java.util.Properties prop)
void	setcancel(boolean arg0)

Methods inherited from class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.ByoCyc.BioCyc

cheackFiles, genericLoadFile, getDictionary, getExternalID, getExternalID2, getName, getSyn, loadCoumpound, loadEnzymes, loadGenes, loadPathways, loadProteins, loadReactions

Methods inherited from class pt.uminho.anote2.datastructures.resources.Dictionary.Loaders.DictionaryLoaderHelp

addTermsAndSyn, addTermsAndSyn, getEntityClass, getNextResourceElementID, getOtherID, getResource, getSourceID, setEntityClass, setNextResourceElementID, setResource, setSourceID

Methods inherited from class pt.uminho.anote2.datastructures.report.resources.PortResourceUpdateReport

getReport, setReport

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface pt.uminho.anote2.resource.dictionary.IDictionaryLoader

getDictionary, getReport

Constructor Detail

BioCycCompound

public BioCycCompound(IDictionary dictionary)

Method Detail

checkFile

public boolean checkFile(java.io.File file)

Specified by:

checkFile in interface IDicionaryFlatFilesLoader

loadTermsFromFile

public IResourceUpdateReport loadTermsFromFile(java.io.File file,
                                               java.util.Properties prop)

Specified by:

loadTermsFromFile in interface IDicionaryFlatFilesLoader

setcancel

public void setcancel(boolean arg0)

Specified by:

setcancel in interface IDictionaryLoader

Overrides:

setcancel in class BioCyc